Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C04
         (910 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    26   0.47 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    26   0.47 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    26   0.47 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   7.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   7.6  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +1

Query: 67  RNWVSKMNAATPSHLCWWDLSVAASKVANGS 159
           R+++  ++ +  SHLC W  + + + V+NG+
Sbjct: 197 RSYIPPLSTSMRSHLCNWGSANSTNIVSNGN 227


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +1

Query: 67  RNWVSKMNAATPSHLCWWDLSVAASKVANGS 159
           R+++  ++ +  SHLC W  + + + V+NG+
Sbjct: 357 RSYIPPLSTSMRSHLCNWGSANSTNIVSNGN 387


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +1

Query: 67  RNWVSKMNAATPSHLCWWDLSVAASKVANGS 159
           R+++  ++ +  SHLC W  + + + V+NG+
Sbjct: 357 RSYIPPLSTSMRSHLCNWGSANSTNIVSNGN 387


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 209 RLDPQSNIAPTLRCLKTEPLA 147
           +LD +++ +P LR L T P A
Sbjct: 115 KLDKKNDDSPALRALLTRPQA 135


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 209 RLDPQSNIAPTLRCLKTEPLA 147
           +LD +++ +P LR L T P A
Sbjct: 115 KLDKKNDDSPALRALLTRPQA 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,634
Number of Sequences: 336
Number of extensions: 3261
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)