Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C04
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0158 + 18613265-18615304                                         31   1.7  
11_06_0459 + 23830204-23830350,23830419-23830592,23830738-238308...    29   3.9  
08_01_0647 + 5596338-5596423,5597442-5597550,5598450-5598579,559...    29   5.1  
01_05_0201 - 19225597-19225890,19227832-19228030,19228133-192283...    29   5.1  

>05_04_0158 + 18613265-18615304
          Length = 679

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 91  AATPSHLCWWDLSVAASKVANGSVFRQRSVGAIFD*GSSRGRFCYIKRREKRRQDIHN 264
           AAT     + +L  A S  A+ ++  + S GA++    + GR   +KR   RR ++ N
Sbjct: 55  AATIERFAYDELEAATSHFADAALLGRGSHGAVYKAVLASGRAVAVKRPSPRRPEVDN 112


>11_06_0459 +
           23830204-23830350,23830419-23830592,23830738-23830865,
           23830947-23831065,23831136-23831217,23831303-23831441,
           23831624-23831778,23831852-23832149,23832325-23832453,
           23832529-23832711,23832840-23832899,23832973-23833101,
           23833177-23833359,23833446-23833490,23833576-23833665,
           23833806-23833892,23833974-23834045,23834120-23834302
          Length = 800

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
 Frame = +2

Query: 581 VWDDXLKAVNXVMFDNFNVLHYVTLDIEVXKVKXTMEKXDFN-----LKIDYVRLLKSSA 745
           +WD    AVN  M D F  +H + LD E   +  ++ K   N     +KI+ +   K+  
Sbjct: 26  LWD----AVNPTMVDEFYGIHMIVLDAEGNSIHVSISKQLANHFRPKIKINSIYTFKNFK 81

Query: 746 IEDDALFLLVNNDLVVI 796
           + +   + ++ N+L ++
Sbjct: 82  VMEHDKYRVLKNNLKIL 98


>08_01_0647 +
           5596338-5596423,5597442-5597550,5598450-5598579,
           5599241-5600016,5600342-5600497,5600627-5600722
          Length = 450

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +3

Query: 30  ILKNLSLCTFSLKELGVKDERSN 98
           ILK+LS+CT SL  L +K+ER++
Sbjct: 312 ILKDLSICTPSLVSLCIKNERTD 334


>01_05_0201 -
           19225597-19225890,19227832-19228030,19228133-19228321,
           19228475-19228785,19228899-19229030
          Length = 374

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 76  VSKMNAA-TPSHLCWWDLSVAASKVANGSVFRQ 171
           + K+NAA T +  C W    AAS  A G VFR+
Sbjct: 200 IEKINAAITKARHCLWMFGEAASVSARGGVFRE 232


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,347,772
Number of Sequences: 37544
Number of extensions: 332918
Number of successful extensions: 569
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)