Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C04
         (910 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.7  
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  

>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1300

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 784 PGGY*IDRNIESCRELGGKCQHFLRKPIHCL 876
           P G  +DR+  SC++ G  CQ   +   HC+
Sbjct: 706 PSGTYLDRDTNSCQQCGQTCQECTKTASHCI 736


>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3160

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +2

Query: 662  EVXKVKXTMEKXDFNLKIDYVRLLKSSAIEDDALFLLVNNDLVVIKSTGILKVVEN 829
            E  +VK   E+    +K +   L +S+ I+     L+ NN++V+ KST I K+V N
Sbjct: 1388 ECLEVKKLAEEKAILMKQEQAALRQSTNIDK----LVSNNEVVLAKSTNIDKLVSN 1439


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,631,176
Number of Sequences: 59808
Number of extensions: 393682
Number of successful extensions: 718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)