Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C04
         (910 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015728-1|AAH15728.1|  393|Homo sapiens TTC23 protein protein.        31   4.4  
AK023230-1|BAB14480.1|  391|Homo sapiens protein ( Homo sapiens ...    31   4.4  
AF411456-1|AAQ03215.1|  447|Homo sapiens proto-oncogene 8 protein.     31   4.4  

>BC015728-1|AAH15728.1|  393|Homo sapiens TTC23 protein protein.
          Length = 393

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 174 QRWSYIRLRIKSWALLLYQTQRKAKARYTQYTLTLTIIELEKG 302
           + W  I  RI+     +YQ Q+K+K   + Y   L  +E+ KG
Sbjct: 179 EEWIEIEARIRLSFAQVYQGQKKSKEALSHYQAALEYVEISKG 221


>AK023230-1|BAB14480.1|  391|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13168 fis, clone NT2RP3003795. ).
          Length = 391

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 174 QRWSYIRLRIKSWALLLYQTQRKAKARYTQYTLTLTIIELEKG 302
           + W  I  RI+     +YQ Q+K+K   + Y   L  +E+ KG
Sbjct: 179 EEWIEIEARIRLSFAQVYQGQKKSKEALSHYQAALEYVEISKG 221


>AF411456-1|AAQ03215.1|  447|Homo sapiens proto-oncogene 8 protein.
          Length = 447

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 174 QRWSYIRLRIKSWALLLYQTQRKAKARYTQYTLTLTIIELEKG 302
           + W  I  RI+     +YQ Q+K+K   + Y   L  +E+ KG
Sbjct: 179 EEWIEIEARIRLSFAQVYQGQKKSKEALSHYQAALEYVEISKG 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,522,190
Number of Sequences: 237096
Number of extensions: 1875520
Number of successful extensions: 6381
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6381
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)