BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_C03
(817 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146719-1|AAO12079.1| 159|Anopheles gambiae odorant-binding pr... 26 1.6
AF437885-1|AAL84180.1| 157|Anopheles gambiae odorant binding pr... 26 1.6
AF515526-1|AAM61893.1| 229|Anopheles gambiae glutathione S-tran... 25 2.8
EF065522-1|ABK59322.1| 255|Anopheles gambiae beta carbonic anhy... 23 8.5
>AY146719-1|AAO12079.1| 159|Anopheles gambiae odorant-binding
protein AgamOBP2 protein.
Length = 159
Score = 25.8 bits (54), Expect = 1.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 219 CVQPXLAGFDACEGPLWLHRSCWSS 145
C +P G D CE W H+ CW +
Sbjct: 127 CTRPK--GKDVCERAFWFHK-CWKT 148
>AF437885-1|AAL84180.1| 157|Anopheles gambiae odorant binding
protein protein.
Length = 157
Score = 25.8 bits (54), Expect = 1.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 219 CVQPXLAGFDACEGPLWLHRSCWSS 145
C +P G D CE W H+ CW +
Sbjct: 127 CTRPK--GKDVCERAFWFHK-CWKT 148
>AF515526-1|AAM61893.1| 229|Anopheles gambiae glutathione
S-transferase protein.
Length = 229
Score = 25.0 bits (52), Expect = 2.8
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -2
Query: 213 QPXLAGFDACEG----PLWLHRSCWSSXPLF 133
QP +AG+D CEG W+ R S+ P +
Sbjct: 179 QPRMAGYDPCEGRPNLTQWMARVRESTNPYY 209
>EF065522-1|ABK59322.1| 255|Anopheles gambiae beta carbonic
anhydrase protein.
Length = 255
Score = 23.4 bits (48), Expect = 8.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 138 VAXCSSSSCGATKVLRKHQSPPGXAVRKGRIHRI*AW 248
+ C S C A +L K + P ++ RI + AW
Sbjct: 97 IIVCGHSDCKAMNLLYKLKDPEFASLDNRRISPLRAW 133
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,062
Number of Sequences: 2352
Number of extensions: 10993
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -