Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_C03
(817 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a ... 88 3e-17
BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein. 88 3e-17
BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a ... 88 3e-17
BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a ... 88 3e-17
AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting ... 88 3e-17
X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for ... 85 2e-16
AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a ... 58 3e-08
X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a pr... 38 0.033
BC070049-1|AAH70049.1| 450|Homo sapiens LanC lantibiotic synthe... 30 8.7
BC059360-1|AAH59360.1| 622|Homo sapiens phosphoglucomutase 2-li... 30 8.7
BC004887-1|AAH04887.2| 252|Homo sapiens LANCL2 protein protein. 30 8.7
AL713665-1|CAD28471.1| 440|Homo sapiens hypothetical protein pr... 30 8.7
AK056591-1|BAB71227.1| 622|Homo sapiens protein ( Homo sapiens ... 30 8.7
AJ278245-1|CAC21715.1| 450|Homo sapiens LanC-like protein 2 pro... 30 8.7
AF353942-1|AAK83286.1| 450|Homo sapiens lantibiotic synthetase ... 30 8.7
AC073347-1|AAQ93360.1| 450|Homo sapiens unknown protein. 30 8.7
AB035966-1|BAA96800.1| 450|Homo sapiens testis-specific adriamy... 30 8.7
AB019210-1|BAA82756.1| 622|Homo sapiens PMMLP protein. 30 8.7
>BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 88.2 bits (209), Expect = 3e-17
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = +2
Query: 320 FMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQAMG 499
F L C YVY+A T P + K R IWGKVTR HGNSG VRA F+SNLP +A+G
Sbjct: 41 FYLGKRCAYVYKAKNNTVTPG--GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIG 98
Query: 500 HRIRVMLYP 526
HRIRVMLYP
Sbjct: 99 HRIRVMLYP 107
Score = 67.7 bits (158), Expect = 5e-11
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 205 GRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGKPLRLCVQS*XEDTIPGG 384
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK ++ PGG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
>BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein.
Length = 110
Score = 88.2 bits (209), Expect = 3e-17
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = +2
Query: 320 FMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQAMG 499
F L C YVY+A T P + K R IWGKVTR HGNSG VRA F+SNLP +A+G
Sbjct: 41 FYLGKRCAYVYKAKNNTVTPG--GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIG 98
Query: 500 HRIRVMLYP 526
HRIRVMLYP
Sbjct: 99 HRIRVMLYP 107
Score = 67.7 bits (158), Expect = 5e-11
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 205 GRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGKPLRLCVQS*XEDTIPGG 384
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK ++ PGG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
>BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 88.2 bits (209), Expect = 3e-17
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = +2
Query: 320 FMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQAMG 499
F L C YVY+A T P + K R IWGKVTR HGNSG VRA F+SNLP +A+G
Sbjct: 41 FYLGKRCAYVYKAKNNTVTPG--GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIG 98
Query: 500 HRIRVMLYP 526
HRIRVMLYP
Sbjct: 99 HRIRVMLYP 107
Score = 67.7 bits (158), Expect = 5e-11
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 205 GRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGKPLRLCVQS*XEDTIPGG 384
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK ++ PGG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
>BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 88.2 bits (209), Expect = 3e-17
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = +2
Query: 320 FMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQAMG 499
F L C YVY+A T P + K R IWGKVTR HGNSG VRA F+SNLP +A+G
Sbjct: 41 FYLGKRCAYVYKAKNNTVTPG--GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIG 98
Query: 500 HRIRVMLYP 526
HRIRVMLYP
Sbjct: 99 HRIRVMLYP 107
Score = 67.7 bits (158), Expect = 5e-11
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 205 GRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGKPLRLCVQS*XEDTIPGG 384
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK ++ PGG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
>AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting
protein 33 protein.
Length = 110
Score = 88.2 bits (209), Expect = 3e-17
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = +2
Query: 320 FMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQAMG 499
F L C YVY+A T P + K R IWGKVTR HGNSG VRA F+SNLP +A+G
Sbjct: 41 FYLGKRCAYVYKAKNNTVTPG--GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIG 98
Query: 500 HRIRVMLYP 526
HRIRVMLYP
Sbjct: 99 HRIRVMLYP 107
Score = 67.7 bits (158), Expect = 5e-11
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 205 GRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGKPLRLCVQS*XEDTIPGG 384
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK ++ PGG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
>X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for
ribosomal protein L35a. ).
Length = 110
Score = 85.4 bits (202), Expect = 2e-16
Identities = 41/69 (59%), Positives = 46/69 (66%)
Frame = +2
Query: 320 FMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQAMG 499
F L C YVY+A T P + K R IWGKVTR HGNSG V A F+SNLP +A+G
Sbjct: 41 FYLGKRCAYVYKAKNNTVTPG--GKPNKTRVIWGKVTRAHGNSGMVLAKFRSNLPAKAIG 98
Query: 500 HRIRVMLYP 526
HRIRVMLYP
Sbjct: 99 HRIRVMLYP 107
Score = 67.7 bits (158), Expect = 5e-11
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 205 GRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGKPLRLCVQS*XEDTIPGG 384
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK ++ PGG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
>AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a
pseudogene 3 protein.
Length = 96
Score = 58.4 bits (135), Expect = 3e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +1
Query: 205 GRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGKPLRLCVQS*XEDTIPG 381
GRL++K+ F GYKR L+NQ E+TALLK+EG +++ FY GK ++ IPG
Sbjct: 2 GRLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG 60
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/58 (50%), Positives = 32/58 (55%)
Frame = +2
Query: 320 FMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQA 493
F L C VY+A T P + K R IWGKVTR H NSG V A F SNLP +A
Sbjct: 40 FYLGKRCACVYKAKSNTMIPGS--KPNKSRVIWGKVTRAHRNSGMVAAKFHSNLPAKA 95
>X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a
protein.
Length = 21
Score = 38.3 bits (85), Expect = 0.033
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1
Query: 205 GRLYAKAVFTGYKRGLRNQ 261
GRL++KA+F GYKRGLRNQ
Sbjct: 3 GRLWSKAIFAGYKRGLRNQ 21
>BC070049-1|AAH70049.1| 450|Homo sapiens LanC lantibiotic
synthetase component C-like 2 (bacterial) protein.
Length = 450
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 414 IARSLXFCHGTSGNGVLXLALYT*TQ 337
+ + CHGT+GNG L+LY TQ
Sbjct: 360 LRKGYGICHGTAGNGYSFLSLYRLTQ 385
>BC059360-1|AAH59360.1| 622|Homo sapiens phosphoglucomutase 2-like
1 protein.
Length = 622
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 263 TRTPLSSRLKEQKTVMMQSFMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWG-KVTRPH 439
TR ++S Q+ + + +L + V VY + P P VP+ KL+A+ G +T H
Sbjct: 117 TRGQVTSSCSSQRLAKLTAAVLLAKDVPVYLFSRYVPTPFVPYAVQKLKAVAGVMITASH 176
>BC004887-1|AAH04887.2| 252|Homo sapiens LANCL2 protein protein.
Length = 252
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 414 IARSLXFCHGTSGNGVLXLALYT*TQ 337
+ + CHGT+GNG L+LY TQ
Sbjct: 162 LRKGYGICHGTAGNGYSFLSLYRLTQ 187
>AL713665-1|CAD28471.1| 440|Homo sapiens hypothetical protein
protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 414 IARSLXFCHGTSGNGVLXLALYT*TQ 337
+ + CHGT+GNG L+LY TQ
Sbjct: 350 LRKGYGICHGTAGNGYSFLSLYRLTQ 375
>AK056591-1|BAB71227.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ32029 fis, clone NTONG1000264. ).
Length = 622
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 263 TRTPLSSRLKEQKTVMMQSFMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWG-KVTRPH 439
TR ++S Q+ + + +L + V VY + P P VP+ KL+A+ G +T H
Sbjct: 117 TRGQVTSSCSSQRLAKLTAAVLLAKDVPVYLFSRYVPTPFVPYAVQKLKAVAGVMITASH 176
>AJ278245-1|CAC21715.1| 450|Homo sapiens LanC-like protein 2
protein.
Length = 450
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 414 IARSLXFCHGTSGNGVLXLALYT*TQ 337
+ + CHGT+GNG L+LY TQ
Sbjct: 360 LRKGYGICHGTAGNGYSFLSLYRLTQ 385
>AF353942-1|AAK83286.1| 450|Homo sapiens lantibiotic synthetase
C-like protein 2 protein.
Length = 450
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 414 IARSLXFCHGTSGNGVLXLALYT*TQ 337
+ + CHGT+GNG L+LY TQ
Sbjct: 360 LRKGYGICHGTAGNGYSFLSLYRLTQ 385
>AC073347-1|AAQ93360.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 414 IARSLXFCHGTSGNGVLXLALYT*TQ 337
+ + CHGT+GNG L+LY TQ
Sbjct: 360 LRKGYGICHGTAGNGYSFLSLYRLTQ 385
>AB035966-1|BAA96800.1| 450|Homo sapiens testis-specific adriamycin
sensitivity protein protein.
Length = 450
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 414 IARSLXFCHGTSGNGVLXLALYT*TQ 337
+ + CHGT+GNG L+LY TQ
Sbjct: 360 LRKGYGICHGTAGNGYSFLSLYRLTQ 385
>AB019210-1|BAA82756.1| 622|Homo sapiens PMMLP protein.
Length = 622
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 263 TRTPLSSRLKEQKTVMMQSFMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWG-KVTRPH 439
TR ++S Q+ + + +L + V VY + P P VP+ KL+A+ G +T H
Sbjct: 117 TRGQVTSSCSSQRLAKLTAAVLLAKDVPVYLFSRYVPTPFVPYAVQKLKAVAGVMITASH 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,923,683
Number of Sequences: 237096
Number of extensions: 1960012
Number of successful extensions: 9048
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9042
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -