Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C03
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...    96   4e-20
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...    96   4e-20
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...    96   4e-20

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score = 96.3 bits (229), Expect = 4e-20
 Identities = 41/70 (58%), Positives = 52/70 (74%)
 Frame = +2

Query: 317 SFMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQAM 496
           SF +   CVYVY+A  +   P+ P +K ++RA+WGKVTR HGN+G+VRA F  NLP  AM
Sbjct: 85  SFYVGKRCVYVYKAETKKCVPQHPERKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAM 144

Query: 497 GHRIRVMLYP 526
           GHRIR+MLYP
Sbjct: 145 GHRIRIMLYP 154



 Score = 72.9 bits (171), Expect = 5e-13
 Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = +1

Query: 166 EPQRSFASIKA----RQGRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGK 333
           +P  S A + A    R GRL+AKAVFTGYKRGLRNQ EN A+LK+EGA+ +    FY GK
Sbjct: 31  KPAASEAKVSAKKYKRHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGK 90

Query: 334 PLRLCVQS*XEDTIPGGPVAKXQAACYLGQ 423
                 ++  +  +P  P  K +     G+
Sbjct: 91  RCVYVYKAETKKCVPQHPERKTRVRAVWGK 120


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score = 96.3 bits (229), Expect = 4e-20
 Identities = 41/70 (58%), Positives = 52/70 (74%)
 Frame = +2

Query: 317 SFMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQAM 496
           SF +   CVYVY+A  +   P+ P +K ++RA+WGKVTR HGN+G+VRA F  NLP  AM
Sbjct: 85  SFYVGKRCVYVYKAETKKCVPQHPERKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAM 144

Query: 497 GHRIRVMLYP 526
           GHRIR+MLYP
Sbjct: 145 GHRIRIMLYP 154



 Score = 72.9 bits (171), Expect = 5e-13
 Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = +1

Query: 166 EPQRSFASIKA----RQGRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGK 333
           +P  S A + A    R GRL+AKAVFTGYKRGLRNQ EN A+LK+EGA+ +    FY GK
Sbjct: 31  KPAASEAKVSAKKYKRHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGK 90

Query: 334 PLRLCVQS*XEDTIPGGPVAKXQAACYLGQ 423
                 ++  +  +P  P  K +     G+
Sbjct: 91  RCVYVYKAETKKCVPQHPERKTRVRAVWGK 120


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score = 96.3 bits (229), Expect = 4e-20
 Identities = 41/70 (58%), Positives = 52/70 (74%)
 Frame = +2

Query: 317 SFMLASHCVYVYRAXKRTPFPEVPWQKXKLRAIWGKVTRPHGNSGSVRAXFKSNLPXQAM 496
           SF +   CVYVY+A  +   P+ P +K ++RA+WGKVTR HGN+G+VRA F  NLP  AM
Sbjct: 85  SFYVGKRCVYVYKAETKKCVPQHPERKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAM 144

Query: 497 GHRIRVMLYP 526
           GHRIR+MLYP
Sbjct: 145 GHRIRIMLYP 154



 Score = 72.9 bits (171), Expect = 5e-13
 Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = +1

Query: 166 EPQRSFASIKA----RQGRLYAKAVFTGYKRGLRNQXENTALLKVEGAKDRNDAVFYAGK 333
           +P  S A + A    R GRL+AKAVFTGYKRGLRNQ EN A+LK+EGA+ +    FY GK
Sbjct: 31  KPAASEAKVSAKKYKRHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGK 90

Query: 334 PLRLCVQS*XEDTIPGGPVAKXQAACYLGQ 423
                 ++  +  +P  P  K +     G+
Sbjct: 91  RCVYVYKAETKKCVPQHPERKTRVRAVWGK 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,959,388
Number of Sequences: 53049
Number of extensions: 537412
Number of successful extensions: 911
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)