Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C02
         (1522 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128837-1|BAC87637.1|  286|Homo sapiens protein ( Homo sapiens ...    37   0.17 

>AK128837-1|BAC87637.1|  286|Homo sapiens protein ( Homo sapiens cDNA
            FLJ46366 fis, clone TESTI4051388. ).
          Length = 286

 Score = 37.1 bits (82), Expect = 0.17
 Identities = 37/156 (23%), Positives = 47/156 (30%), Gaps = 4/156 (2%)
 Frame = +2

Query: 548  PXQXTXPRKXAXXAPKXDXXXPQQXGXXPGGAPA-TXXRTXXXAXXPLASXKXXXXXPX- 721
            P + +  R     +P+            P  +P  T  R       P AS K        
Sbjct: 121  PPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASPTRTPPRASPKRTPPRASP 180

Query: 722  --TPPQXAXXRAPPXXSXAPAANXPXRQSTXXPPRTXDXTSEXPXXQPPTXTXXXAPPNR 895
              TPP+ +  RAPP  S  P    P    T  PPR     +  P  + P  T   A P R
Sbjct: 181  RRTPPRASPTRAPPRAS--PKRTPPTASPTRTPPRA--SPTRTPPTESPARTPPRASPTR 236

Query: 896  XRQSSXXXRRAHHXEVXXXXPRTXXXIXRPRXXQTR 1003
               +    R           PR       PR    R
Sbjct: 237  TPPTESPARTPSRASTRRTPPRASPTRTPPRASPKR 272



 Score = 33.9 bits (74), Expect = 1.6
 Identities = 27/94 (28%), Positives = 31/94 (32%)
 Frame = +2

Query: 722  TPPQXAXXRAPPXXSXAPAANXPXRQSTXXPPRTXDXTSEXPXXQPPTXTXXXAPPNRXR 901
            TPP+ +  R PP  S       P R S   PP T    +  P   PPT T   A P R  
Sbjct: 48   TPPRASPRRTPPRASPR---RTPPRASLTRPP-TRAPPTRMPPTAPPTRTPPTASPARTP 103

Query: 902  QSSXXXRRAHHXEVXXXXPRTXXXIXRPRXXQTR 1003
             +    R           PR       PR    R
Sbjct: 104  PTESPARTPPTASPARTPPRASPTRTPPRASPRR 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.311    0.128    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,266,643
Number of Sequences: 237096
Number of extensions: 999479
Number of successful extensions: 1449
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22636172342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)