Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C02
         (1522 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    32   1.8  
AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    30   7.3  
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    30   7.3  
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    30   7.3  
AE014298-609|AAF45927.1| 1357|Drosophila melanogaster CG15570-PA...    30   9.6  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 23/86 (26%), Positives = 25/86 (29%)
 Frame = +2

Query: 632 PGGAPATXXRTXXXAXXPLASXKXXXXXPXTPPQXAXXRAPPXXSXAPAANXPXRQSTXX 811
           P   P T   T      P A+       P  P        PP     P    P R  T  
Sbjct: 234 PRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRPPTTR 293

Query: 812 PPRTXDXTSEXPXXQPPTXTXXXAPP 889
           PP T    +  P   PP  T    PP
Sbjct: 294 PPATYLPPTNKPL--PPVTTRLPPPP 317



 Score = 31.5 bits (68), Expect = 3.2
 Identities = 22/86 (25%), Positives = 25/86 (29%)
 Frame = +2

Query: 632 PGGAPATXXRTXXXAXXPLASXKXXXXXPXTPPQXAXXRAPPXXSXAPAANXPXRQSTXX 811
           P   P T   T      P A+       P  P        PP     P    P +  T  
Sbjct: 277 PRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPPTTR 336

Query: 812 PPRTXDXTSEXPXXQPPTXTXXXAPP 889
           PP T    +  P   PP  T    PP
Sbjct: 337 PPATYLPPTNKP--PPPVTTRRPTPP 360


>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p
           protein.
          Length = 846

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 28/121 (23%), Positives = 34/121 (28%), Gaps = 2/121 (1%)
 Frame = +2

Query: 533 VRXXXPXQXTXPRKXAXXAPKXDXXXPQQXGXX--PGGAPATXXRTXXXAXXPLASXKXX 706
           V+   P +   P      +PK +   P   G    PG  P    R        +      
Sbjct: 84  VQVPAPPKVNPPPPPRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPP 143

Query: 707 XXXPXTPPQXAXXRAPPXXSXAPAANXPXRQSTXXPPRTXDXTSEXPXXQPPTXTXXXAP 886
                 PP      APP     P    P  +    PP     T E P   PP  T    P
Sbjct: 144 APPTLVPPPPP---APPTIKPPPPPAPPTVEPPPPPPPAPP-TVEPPPPPPPAPTKVEPP 199

Query: 887 P 889
           P
Sbjct: 200 P 200


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
           isoform A protein.
          Length = 1109

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 28/121 (23%), Positives = 34/121 (28%), Gaps = 2/121 (1%)
 Frame = +2

Query: 533 VRXXXPXQXTXPRKXAXXAPKXDXXXPQQXGXX--PGGAPATXXRTXXXAXXPLASXKXX 706
           V+   P +   P      +PK +   P   G    PG  P    R        +      
Sbjct: 347 VQVPAPPKVNPPPPPRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPP 406

Query: 707 XXXPXTPPQXAXXRAPPXXSXAPAANXPXRQSTXXPPRTXDXTSEXPXXQPPTXTXXXAP 886
                 PP      APP     P    P  +    PP     T E P   PP  T    P
Sbjct: 407 APPTLVPPPPP---APPTIKPPPPPAPPTVEPPPPPPPAPP-TVEPPPPPPPAPTKVEPP 462

Query: 887 P 889
           P
Sbjct: 463 P 463


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
           isoform B protein.
          Length = 1150

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 28/121 (23%), Positives = 34/121 (28%), Gaps = 2/121 (1%)
 Frame = +2

Query: 533 VRXXXPXQXTXPRKXAXXAPKXDXXXPQQXGXX--PGGAPATXXRTXXXAXXPLASXKXX 706
           V+   P +   P      +PK +   P   G    PG  P    R        +      
Sbjct: 347 VQVPAPPKVNPPPPPRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPP 406

Query: 707 XXXPXTPPQXAXXRAPPXXSXAPAANXPXRQSTXXPPRTXDXTSEXPXXQPPTXTXXXAP 886
                 PP      APP     P    P  +    PP     T E P   PP  T    P
Sbjct: 407 APPTLVPPPPP---APPTIKPPPPPAPPTVEPPPPPPPAPP-TVEPPPPPPPAPTKVEPP 462

Query: 887 P 889
           P
Sbjct: 463 P 463


>AE014298-609|AAF45927.1| 1357|Drosophila melanogaster CG15570-PA
            protein.
          Length = 1357

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
 Frame = +2

Query: 725  PPQXAXXRAPPXXSXAPAANXPXRQS-TXXPPRTXDXTSEXPXXQPPTXTXXXAPPN 892
            PP        P  +  P    P  Q  T  PP     T++ P  +PPT       PN
Sbjct: 1271 PPTVQPPTNQPPTNQPPTNQPPTNQPPTNQPPTNQPPTNQPPTNEPPTNRPPSPSPN 1327


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.311    0.128    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,763,449
Number of Sequences: 53049
Number of extensions: 295364
Number of successful extensions: 382
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8493783408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)