Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B24
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 33 0.39
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 32 0.68
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 32 0.68
U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical p... 29 6.4
U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical p... 29 6.4
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 28 8.4
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 226 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPPFPGARG 378
QP VGN Y+P P +PP Y GY P G P +P G
Sbjct: 91 QPLVGNSYDP----PVRFDPPYAYRATATGYMPTVPGLSTNSSPYYPRTSG 137
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 226 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPPFPGARG 378
QP VGN Y+P P +PP Y GY P G P +P G
Sbjct: 62 QPLVGNSYDP----PVRFDPPYAYRATATGYMPTVPGLSTNSSPYYPRTSG 108
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 226 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPPFPGARG 378
QP VGN Y+P P +PP Y GY P G P +P G
Sbjct: 91 QPLVGNSYDP----PVRFDPPYAYRATATGYMPTVPGLSTNSSPYYPRTSG 137
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +1
Query: 247 YEPIDNRPYIVN--PPKDYNPNGNGYEPIDNGAYYVDPPPFPGA 372
Y P PY PP +N G+G GAY+ PPP GA
Sbjct: 8 YNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPPPMHGA 50
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +1
Query: 247 YEPIDNRPYIVN--PPKDYNPNGNGYEPIDNGAYYVDPPPFPGA 372
Y P PY PP +N G+G GAY+ PPP GA
Sbjct: 8 YNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPPPMHGA 50
>U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical
protein F01F1.1c protein.
Length = 641
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 280 NPPKDYNPNGNGYEPIDNGAYYVDPPPFP 366
NPP Y G G+ P G+ + PPP P
Sbjct: 57 NPPSAYGQFGGGFHPSTWGSGPIVPPPPP 85
>U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical
protein F01F1.1a protein.
Length = 646
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 280 NPPKDYNPNGNGYEPIDNGAYYVDPPPFP 366
NPP Y G G+ P G+ + PPP P
Sbjct: 62 NPPSAYGQFGGGFHPSTWGSGPIVPPPPP 90
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 245 PFPTVGWAKNGFGVIDHN*VSV 180
P P+V W NG + DHN +S+
Sbjct: 75 PLPSVIWRVNGKSITDHNRISI 96
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 245 PFPTVGWAKNGFGVIDHN*VSV 180
P P+V W NG + DHN +S+
Sbjct: 75 PLPSVIWRVNGKSITDHNRISI 96
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 245 PFPTVGWAKNGFGVIDHN*VSV 180
P P+V W NG + DHN +S+
Sbjct: 75 PLPSVIWRVNGKSITDHNRISI 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,741,661
Number of Sequences: 27780
Number of extensions: 236705
Number of successful extensions: 599
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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