Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B23
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0303 + 2194345-2194414,2195228-2195328,2195818-2196657,219...    29   3.5  

>06_01_0303 +
           2194345-2194414,2195228-2195328,2195818-2196657,
           2196743-2196889,2196985-2197365
          Length = 512

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 275 NNVNQMGLXXVVESCLGQLTKLQKPYNM**PCTILQKNGAG 397
           NN  Q+G+   +E  +  LT+ Q  YN   PC++L  NG+G
Sbjct: 151 NNWLQIGVKPGIEELIISLTQFQAKYNF--PCSLL-SNGSG 188


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,860,419
Number of Sequences: 37544
Number of extensions: 291000
Number of successful extensions: 521
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)