Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B23
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68227-2|CAA92509.1|  322|Caenorhabditis elegans Hypothetical pr...    31   1.3  
U41037-3|AAA82389.1|  378|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z93383-10|CAB07632.1|  286|Caenorhabditis elegans Hypothetical p...    28   7.2  

>Z68227-2|CAA92509.1|  322|Caenorhabditis elegans Hypothetical
           protein F49C12.4 protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +1

Query: 178 IWMKENQFIVDDVSKIIKEAIENSIGGTAYQHKQCQPNGTSXSC*VMSGAVD*VTKTIQY 357
           IW K   F  D  S I K+  E  +GG  +Q+     NG   +  +     D  TKT+ +
Sbjct: 148 IWPKTEFFGADPSSDINKDLYEKELGGKYFQYAVGGQNGMQEAFVLGKNEGDYRTKTVMH 207

Query: 358 V 360
           +
Sbjct: 208 I 208


>U41037-3|AAA82389.1|  378|Caenorhabditis elegans Hypothetical
           protein T24C12.1 protein.
          Length = 378

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
 Frame = +1

Query: 181 WMKENQFIVDDVSKIIKEAIENSIGGTAYQHKQCQPNGTSXSC*VMSGAVD*V-----TK 345
           W+K    IVD V   +  +I ++   + Y H Q   N +   C V       +      +
Sbjct: 152 WIKCCTLIVDAVMVFVFASIMSTAHTSLYSHIQVLHNSSKELCSVWDNVYQTLICCPPEE 211

Query: 346 TIQYVVTXHNTAEEWCRTAYSSSCY 420
            +Q      N  + +C T +S+ CY
Sbjct: 212 VLQTCADFLNVTKSFCPTGHSNDCY 236


>Z93383-10|CAB07632.1|  286|Caenorhabditis elegans Hypothetical
           protein F54B8.11 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 390 PFFCSIVXGHYILYGFC-NLVNCP 322
           P  C  +   YIL+GFC N+V+ P
Sbjct: 131 PILCHFLFDQYILFGFCGNVVDVP 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,873,164
Number of Sequences: 27780
Number of extensions: 278897
Number of successful extensions: 616
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)