Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B22
         (1078 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1509 - 27246721-27247350                                         29   4.8  
11_06_0610 - 25449085-25453284                                         29   6.4  
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045...    29   8.4  

>07_03_1509 - 27246721-27247350
          Length = 209

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 415 PLVIPTFYPKSPLVGSLPKVPXDLSLPPIFPCSP 314
           P  IP   P SP++GSLP       L P +  SP
Sbjct: 20  PATIPVAVPPSPVLGSLPSAIKCNPLAPFYRFSP 53


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = -1

Query: 535  APVLXDPPXTGNFGLQVPKYSGXRKACPGQFXRDSSFEETP-LVIPTFYPKSPLVGSLPK 359
            APV+ +PP T +   QVP  S    A         S  ETP    P   P+     S+PK
Sbjct: 1051 APVISEPPPTKSSPPQVPVTSEPPPAKSSPPHEPISPPETPEKSYPPSTPEESSPPSVPK 1110

Query: 358  V---PXDLSLPP 332
                P + SLPP
Sbjct: 1111 ASSPPTEKSLPP 1122


>05_06_0005 + 24802843-24803101,24804086-24804333,24804417-24804572,
            24804956-24805114,24805862-24805929,24806044-24806433,
            24806515-24806563,24806636-24806788,24807416-24807589,
            24808207-24808362,24808705-24808756,24808830-24808988,
            24809058-24809094,24809218-24809252,24809349-24809400,
            24809614-24809663,24810590-24811924,24812688-24812825,
            24812907-24812957,24813081-24814237
          Length = 1625

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 314  WGTGENGGEGKVXRDFGERXDQGTFWVKGG 403
            +G G   G G+   DFG R DQG+ W   G
Sbjct: 1042 FGRGRGRGRGRESGDFGGRNDQGS-WKNSG 1070


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,376,683
Number of Sequences: 37544
Number of extensions: 381112
Number of successful extensions: 736
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3211228900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)