Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B21
(914 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.18
07_03_1136 + 24218601-24218734,24218769-24219906 31 0.97
02_05_0686 - 30900748-30902167,30903442-30904742 31 0.97
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 30 2.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 5.2
01_01_0796 + 6190931-6192745 29 5.2
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 6.8
11_03_0095 - 9905323-9905793 28 9.0
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 28 9.0
07_03_1140 - 24258627-24258849,24259967-24260089,24260200-242609... 28 9.0
01_07_0082 - 40965947-40967023 28 9.0
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 369 GXGGPPXPPXXGGXXXXXFXXXAGGGXXFXXPPPXXXXXXXXXPPPP 509
G GGPP PP G A GG PPP P PP
Sbjct: 1156 GLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPP 1202
Score = 31.5 bits (68), Expect = 0.97
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 709 GGGXPPPPPXXGGGXXFPXXPP 774
G G PPPPP GG P PP
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPP 1126
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +3
Query: 369 GXGGPPXPPXXGGXXXXXFXXXAGG-GXXFXXPPPXXXXXXXXXPPPP 509
G G PP PP GG GG G P P PPPP
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPP 1152
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXPPP 708
GG G PPP G GG PPP
Sbjct: 1155 GGLGGPPAPPPPAGFRGGTPPP 1176
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 466 GGXKXXXPPPAXXKXXXXFXPPXXGGXGGPPXP 368
GG + PP PP GG GGPP P
Sbjct: 1131 GGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAP 1163
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -1
Query: 470 GGGGXKXXP-PPRXXXKXXXXXPPPRXGXGGAPXPP 366
G GG + P PP PPP G GG P PP
Sbjct: 1129 GLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPP 1164
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 369 GXGGPPXPPXXGGXXXXXFXXXAGGGXXFXXPPPXXXXXXXXXPPPP 509
G GG P PP GG G PPP PPPP
Sbjct: 1144 GIGGVPPPPPVGGLGGPP-APPPPAGFRGGTPPPNAHGGVAPPPPPP 1189
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +1
Query: 709 GGGXPPPPPXXG-GGXXFPXXPP 774
GG PPPPP G GG P PP
Sbjct: 1180 GGVAPPPPPPRGHGGVGGPPTPP 1202
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 712 GGXPPPPPXXG-GGXXFPXXPPXXR 783
GG PPPPP G GG P P R
Sbjct: 1146 GGVPPPPPVGGLGGPPAPPPPAGFR 1170
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXPPPXXP 699
GG G PPP G GG PP P
Sbjct: 1116 GGITGVPPPPPIGGLGGHQAPPAPP 1140
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 0.97
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -2
Query: 508 GGGGXXFXXXXXXGGGXKXXXPPPAXXKXXXXFXPPXXGGXGGPP 374
GGGG GGG PP + PP GG GG P
Sbjct: 138 GGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGP 182
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXPPP 708
GG G PP GGGGG PP
Sbjct: 112 GGGGGPPSLPPGAGGGGGARPP 133
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXP 714
GG G P P GGGGG P
Sbjct: 125 GGGGGARPPAPGGGGGGGAP 144
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 0.97
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Frame = -1
Query: 566 PPPXPPPXXXXXXXXXXXXXXXXXXXXXXXGXGGGGXKXXPPPRXXXKXXXXXPPPRXG- 390
PPP PPP G PPP K PPP G
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 389 -XGGAPXPP 366
GG P PP
Sbjct: 373 KKGGPPPPP 381
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -1
Query: 566 PPPXPPPXXXXXXXXXXXXXXXXXXXXXXXGXGGGGXKXXPPPRXXXKXXXXXPPPRXGX 387
PPP PPP G PPP K PPP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP--PK 383
Query: 386 GGAPXPP 366
GGA PP
Sbjct: 384 GGASRPP 390
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 712 GGXPPPPPXXGGGXXFPXXPP 774
G PPPPP GG P PP
Sbjct: 361 GPSPPPPPPPGGKKGGPPPPP 381
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 437 GGGVXXFXPPPPXXXXXKXXPPPPXL 514
GGG F PPP + PPPP +
Sbjct: 63 GGGASSFDQPPPPVSYHRLSPPPPAM 88
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -1
Query: 782 RXXGGXXGKXXPPPXXG-GGGGXPPPXXP 699
R G G PP G GGGG PPP P
Sbjct: 362 RPPGPGPGPPPPPGAAGRGGGGPPPPALP 390
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Frame = -1
Query: 566 PPPXPPPXXXXXXXXXXXXXXXXXXXXXXXGXGGGGXKXXPPPRXXXKXXXXXPPP---- 399
PPP PPP G G G PPP PPP
Sbjct: 283 PPPAPPPLPPSHHHHHGHHPPPPHPLPP--GAGAGAGTGAPPPPPAHPAAPAPPPPAPSP 340
Query: 398 -RXGXGGAPXPP 366
G G P PP
Sbjct: 341 SAAGAGSGPPPP 352
>01_01_0796 + 6190931-6192745
Length = 604
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 721 PPPPPXXGGGXXFPXXPP 774
PPPPP GG P PP
Sbjct: 239 PPPPPAAGGSLWIPELPP 256
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 761 GKXXPPPXXGGGGGXPPPXXP 699
G PPP G GG PPP P
Sbjct: 927 GAPPPPPPPGKPGGPPPPPPP 947
>11_03_0095 - 9905323-9905793
Length = 156
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXPPPXXP 699
GG G GGGGG PPP P
Sbjct: 91 GGADGMERRRRGLGGGGGSPPPSLP 115
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 470 GGGGXKXXPPPRXXXKXXXXXPPPRXGXGGAPXPP 366
GG G K PPR + P PR G PP
Sbjct: 139 GGAGRKDLSPPRRRQRQDTPSPDPRDAAGKDLSPP 173
>07_03_1140 -
24258627-24258849,24259967-24260089,24260200-24260921,
24260945-24261073,24261484-24261714
Length = 475
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 700 GXXGGGXPPPPPXXGG 747
G GGG PPPPP G
Sbjct: 53 GGGGGGWPPPPPPLSG 68
>01_07_0082 - 40965947-40967023
Length = 358
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 446 PPPRXXXKXXXXXPPPRXGXGGAPXPP 366
PPP+ PPP+ G G P PP
Sbjct: 256 PPPQYGYGYPAQPPPPQAGYGYPPPPP 282
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,097,629
Number of Sequences: 37544
Number of extensions: 575107
Number of successful extensions: 4912
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4388
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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