Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B21
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 6.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 24 6.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 24 6.4
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 8.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 8.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 8.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 715 GXPPPPPXXGGGXXFPXXPPXXRXXXXXKXXXXXXXXXXXXXXXXXPPXPXXXAGXLXFL 894
G PPPPP GG PP PP P G F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG--GFK 781
Query: 895 SXPPPP 912
PPPP
Sbjct: 782 GGPPPP 787
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 712 GGXPPPPPXXGGGXXFPXXPP 774
GG PPPPP GG P PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPP 776
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -1
Query: 566 PPPXPPPXXXXXXXXXXXXXXXXXXXXXXXGXGGGGXKXXPPPRXXXKXXXXXPPPRXGX 387
PPP PPP GG PPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPI----SGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 386 GGAPXPP 366
GG P PP
Sbjct: 782 GGPPPPP 788
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Frame = +3
Query: 375 GGPPXPPXXGGXXXXXFXXXA-----GGGXXFXXPPPXXXXXXXXXPPPPXXFF 521
GGPP PP GG GG PPP PPPP F
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXPPPXXP 699
GG PPP G GG PPP P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 375 GGPPXPPXXGGXXXXXFXXXAGGGXXFXXPPPXXXXXXXXXPPPP 509
GGPP PP GG GG PPP PPPP
Sbjct: 724 GGPPPPPPPGG-----LPPITGGPP--PPPPPGGLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 715 GXPPPPPXXGGGXXFPXXPPXXRXXXXXKXXXXXXXXXXXXXXXXXPPXPXXXAGXLXFL 894
G PPPPP GG PP PP P G F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG--GFK 781
Query: 895 SXPPPP 912
PPPP
Sbjct: 782 GGPPPP 787
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 712 GGXPPPPPXXGGGXXFPXXPP 774
GG PPPPP GG P PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPP 776
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -1
Query: 566 PPPXPPPXXXXXXXXXXXXXXXXXXXXXXXGXGGGGXKXXPPPRXXXKXXXXXPPPRXGX 387
PPP PPP GG PPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPI----SGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 386 GGAPXPP 366
GG P PP
Sbjct: 782 GGPPPPP 788
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Frame = +3
Query: 375 GGPPXPPXXGGXXXXXFXXXA-----GGGXXFXXPPPXXXXXXXXXPPPPXXFF 521
GGPP PP GG GG PPP PPPP F
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXPPPXXP 699
GG PPP G GG PPP P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 375 GGPPXPPXXGGXXXXXFXXXAGGGXXFXXPPPXXXXXXXXXPPPP 509
GGPP PP GG GG PPP PPPP
Sbjct: 724 GGPPPPPPPGG-----LPPITGGPP--PPPPPGGLPPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 715 GXPPPPPXXGGGXXFPXXPPXXRXXXXXKXXXXXXXXXXXXXXXXXPPXPXXXAGXLXFL 894
G PPPPP GG PP PP P G F
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG--GFK 364
Query: 895 SXPPPP 912
PPPP
Sbjct: 365 GGPPPP 370
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 712 GGXPPPPPXXGGGXXFPXXPP 774
GG PPPPP GG P PP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPP 359
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -1
Query: 566 PPPXPPPXXXXXXXXXXXXXXXXXXXXXXXGXGGGGXKXXPPPRXXXKXXXXXPPPRXGX 387
PPP PPP GG PPP PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPI----SGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Query: 386 GGAPXPP 366
GG P PP
Sbjct: 365 GGPPPPP 371
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Frame = +3
Query: 375 GGPPXPPXXGGXXXXXFXXXA-----GGGXXFXXPPPXXXXXXXXXPPPPXXFF 521
GGPP PP GG GG PPP PPPP F
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXPPPXXP 699
GG PPP G GG PPP P
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 375 GGPPXPPXXGGXXXXXFXXXAGGGXXFXXPPPXXXXXXXXXPPPP 509
GGPP PP GG GG PPP PPPP
Sbjct: 307 GGPPPPPPPGG-----LPPITGGPP--PPPPPGGLPPISGGPPPP 344
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 721 PPPPPXXGGGXXFPXXPP 774
PPPPP GGG P PP
Sbjct: 41 PPPPPPCGGGYEAPPPPP 58
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 4/71 (5%)
Frame = -1
Query: 566 PPPXPPPXXXXXXXXXXXXXXXXXXXXXXXGXGGGGXKXXPPPRXXXKXXXXXPP----P 399
PPP PPP G GG PPP PP P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 398 RXGXGGAPXPP 366
G G P PP
Sbjct: 357 SAGPGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 4/71 (5%)
Frame = -1
Query: 566 PPPXPPPXXXXXXXXXXXXXXXXXXXXXXXGXGGGGXKXXPPPRXXXKXXXXXPP----P 399
PPP PPP G GG PPP PP P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 398 RXGXGGAPXPP 366
G G P PP
Sbjct: 367 SAGPGMYPPPP 377
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 712 GGXPPPPPXXGGGXXFPXXPP 774
GG PPPPP GG P PP
Sbjct: 81 GGIPPPPPMFAGG--IPPPPP 99
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 712 GGXPPPPPXXGGGXXFPXXPP 774
GG PPPPP GG P PP
Sbjct: 92 GGIPPPPPMMGG---IPPPPP 109
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGG 720
GG G PPP GGGGG
Sbjct: 266 GGGGGYPQPPPQQGGGGG 283
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 709 GGGXPPPPPXXGGG 750
GGG P PPP GGG
Sbjct: 268 GGGYPQPPPQQGGG 281
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 712 GGXPPPPPXXGGGXXFPXXPP 774
GG PPPPP G P PP
Sbjct: 787 GGIPPPPPL---GIIPPPPPP 804
Score = 23.0 bits (47), Expect(2) = 6.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 700 GXXGGGXPPPPP 735
G G G PPPPP
Sbjct: 763 GPVGVGVPPPPP 774
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 712 GGXPPPPPXXGGGXXFPXXPP 774
GG PPPPP G P PP
Sbjct: 787 GGIPPPPPL---GIIPPPPPP 804
Score = 23.0 bits (47), Expect(2) = 6.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 700 GXXGGGXPPPPP 735
G G G PPPPP
Sbjct: 763 GPVGVGVPPPPP 774
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXPPPXXP 699
GG G PP GGGGG P P
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPP 643
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 700 GXXGGGXPPPPPXXGGGXXFPXXPP 774
G GGG PP P GGG P PP
Sbjct: 620 GPGGGGGPPRGPGGGGGGG-PTGPP 643
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 773 GGXXGKXXPPPXXGGGGGXPPPXXP 699
GG G PP GGGGG P P
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPP 643
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 700 GXXGGGXPPPPPXXGGGXXFPXXPP 774
G GGG PP P GGG P PP
Sbjct: 620 GPGGGGGPPRGPGGGGGGG-PTGPP 643
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1
Query: 476 GXGGGGXKXXPPPRXXXKXXXXXPPPRXGXGGAPXPPXF 360
G GGGG PP P P G GGAP PP +
Sbjct: 23 GGGGGGCGCGAPP--PPPACAPPPAPACG-GGAPPPPAY 58
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.8 bits (54), Expect(2) = 8.5
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 470 GGGGXKXXPPPRXXXKXXXXXPPPRXGXGGAPXP 369
GG PPPR PPPR P P
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSP 167
Score = 20.6 bits (41), Expect(2) = 8.5
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 566 PPPXPPP 546
PPP PPP
Sbjct: 122 PPPPPPP 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,069,926
Number of Sequences: 27780
Number of extensions: 255977
Number of successful extensions: 2440
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1978
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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