Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B18
(996 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 42 8e-04
02_02_0414 + 9972157-9972257,9972925-9973003,9973657-9973755,997... 40 0.004
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082... 39 0.007
06_02_0206 + 13005863-13005966,13006918-13007080,13008534-130086... 38 0.012
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 37 0.022
01_06_1193 - 35306608-35306777,35306869-35306890,35306988-353069... 36 0.038
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496... 36 0.067
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 33 0.35
08_01_0063 + 439640-439740,440067-440145,440586-440684,440767-44... 32 0.82
10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306 30 2.5
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 29 5.8
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 41.9 bits (94), Expect = 8e-04
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 325 KGLTTSAGKETTQW*MYTLTVLETCVKNCGKPFHVLVCNKEFISELVKLI 474
K L G + + + LT+LET +KNCG FH+ V ++ + E+VK++
Sbjct: 41 KALKKRIGHKNPKVQILALTLLETAIKNCGDIFHMHVAERDVLHEMVKIV 90
>02_02_0414 +
9972157-9972257,9972925-9973003,9973657-9973755,
9973848-9973913,9974225-9974376,9974503-9974584,
9974696-9974781,9974919-9975098,9975320-9975717,
9976192-9976790,9977141-9977239
Length = 646
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 370 MYTLTVLETCVKNCGKPFHVLVCNKEFISELVKLI 474
+ LT+LET +KNCG H+ V K+ + E+VK++
Sbjct: 56 LLALTLLETMIKNCGDIVHMQVAEKDILHEMVKIV 90
>05_05_0201 +
23206859-23206998,23207858-23207936,23208121-23208219,
23208561-23208674,23208762-23208910,23209010-23209091,
23209170-23209255,23209520-23209750,23209830-23210727
Length = 625
Score = 38.7 bits (86), Expect = 0.007
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 373 YTLTVLETCVKNCGKPFHVLVCNKEFISELVKLIGPGH 486
+TLT+LET +KNCG+ H V + + E+V+++ H
Sbjct: 70 FTLTLLETMMKNCGEYVHFEVVEQHILQEMVRIVQKKH 107
>06_02_0206 +
13005863-13005966,13006918-13007080,13008534-13008632,
13008704-13008817,13009094-13009254,13009746-13009827,
13009972-13010057,13011563-13011742,13011913-13012424,
13012844-13013478
Length = 711
Score = 37.9 bits (84), Expect = 0.012
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 325 KGLTTSAGKETTQW*MYTLTVLETCVKNCGKPFHVLVCNKEFISELVKL 471
K + G + ++ + LT+LET +KNCG H+ V ++ + E+VK+
Sbjct: 70 KSIKKRIGHKNSKIQLLALTLLETLIKNCGDFVHMHVAERDILHEMVKI 118
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 37.1 bits (82), Expect = 0.022
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 373 YTLTVLETCVKNCGKPFHVLVCNKEFISELVKLI 474
+ LT+LET +KNCG H V ++ + E++K++
Sbjct: 59 FALTLLETLMKNCGDHVHSQVVERDILQEMIKIV 92
>01_06_1193 -
35306608-35306777,35306869-35306890,35306988-35306996,
35307107-35307115,35307470-35307491,35307981-35308784,
35308861-35309088,35309250-35309335,35309449-35309530,
35309630-35309778,35309992-35310105,35310961-35311059,
35311243-35311321,35311873-35312021
Length = 673
Score = 36.3 bits (80), Expect = 0.038
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 373 YTLTVLETCVKNCGKPFHVLVCNKEFISELVKLI 474
Y LT+LET +KNCG+ + V + + E+VK+I
Sbjct: 73 YALTLLETMMKNCGEYVQLEVAEQHVLQEMVKII 106
>11_01_0620 -
4964263-4965052,4965578-4965663,4966332-4966413,
4967052-4967156,4967600-4967772,4967988-4968101,
4973939-4974037,4974320-4974398,4975424-4975492,
4975955-4976061
Length = 567
Score = 35.5 bits (78), Expect = 0.067
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 325 KGLTTSAGKETTQW*MYTLTVLETCVKNCGKPFHVLVCNKEFISELVKLI 474
K L G + ++ + TL VLET KNCG + + ++ +SE+VK++
Sbjct: 66 KLLKKRLGNKNSKVQILTLYVLETLSKNCGDVVYQQIIERDILSEMVKIV 115
>10_07_0176 -
13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 33.1 bits (72), Expect = 0.35
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 333 DYKRWERNYTVVNVHADCPGNMRKKLWKAVPCSRLQ*GIYIRVGKIDWPRSL 488
D+KR++ + ++ N H D ++ + W+ P RLQ G +R +D +L
Sbjct: 146 DWKRFQNDMSINNAHVDV---LQGQKWETTPWKRLQVGDIVRTANLDGETNL 194
>08_01_0063 +
439640-439740,440067-440145,440586-440684,440767-440880,
441218-441381,442237-442312,442502-442587,442706-442861,
442934-443264
Length = 401
Score = 31.9 bits (69), Expect = 0.82
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 370 MYTLTVLETCVKNCGKPFHVLVCNKEFISELVKLI 474
+Y + +LE + NCG+P H V + + LVK++
Sbjct: 56 LYAVMLLEMLMNNCGEPIHKQVIDNGLLPILVKIV 90
>10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306
Length = 387
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 379 LTVLETCVKNCGKPFHVLVCNKEFISELVKLI 474
L +LET VKNC K F + + + E+VKLI
Sbjct: 105 LVLLETVVKNCEKAFSEIAAER-VLDEMVKLI 135
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 376 TLTVLETCVKNCGKPFHVLVCNKEFISELVKLI 474
+L +LET VKNC K F V + + E+V+LI
Sbjct: 441 SLVLLETIVKNCEKAFSE-VAAERVLDEMVRLI 472
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,845,566
Number of Sequences: 37544
Number of extensions: 201319
Number of successful extensions: 423
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2916970260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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