Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B18
         (996 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41542-4|AAK39154.1|  437|Caenorhabditis elegans Hypothetical pr...    67   2e-11
U41542-3|AAK39156.1|  403|Caenorhabditis elegans Hypothetical pr...    67   2e-11
U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte grow...    39   0.006
Z68014-4|CAA92026.2|  588|Caenorhabditis elegans Hypothetical pr...    31   1.7  
Z70684-11|CAA94604.1| 1141|Caenorhabditis elegans Hypothetical p...    28   9.0  
Z70682-10|CAA94588.1| 1141|Caenorhabditis elegans Hypothetical p...    28   9.0  
AB073210-1|BAB70473.1| 1141|Caenorhabditis elegans rac effector ...    28   9.0  

>U41542-4|AAK39154.1|  437|Caenorhabditis elegans Hypothetical
           protein C07A12.7a protein.
          Length = 437

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +1

Query: 370 MYTLTVLETCVKNCGKPFHVLVCNKEFISELVKLIGP 480
           MYTLTVLET VKNC   FHVLVCNK+F+ +L+KLIGP
Sbjct: 97  MYTLTVLETAVKNCNHHFHVLVCNKDFVQDLIKLIGP 133


>U41542-3|AAK39156.1|  403|Caenorhabditis elegans Hypothetical
           protein C07A12.7b protein.
          Length = 403

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +1

Query: 370 MYTLTVLETCVKNCGKPFHVLVCNKEFISELVKLIGP 480
           MYTLTVLET VKNC   FHVLVCNK+F+ +L+KLIGP
Sbjct: 97  MYTLTVLETAVKNCNHHFHVLVCNKDFVQDLIKLIGP 133


>U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte growth
           factor-regulatedtk substrate (hrs) family protein 1
           protein.
          Length = 729

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 373 YTLTVLETCVKNCGKPFHVLVCNKEFISELVKLI 474
           +TL VL+ CVKNCG   H  V  +EF+ +   L+
Sbjct: 60  HTLLVLDACVKNCGHKVHAEVATREFMEDFKNLV 93


>Z68014-4|CAA92026.2|  588|Caenorhabditis elegans Hypothetical
           protein W04G3.4 protein.
          Length = 588

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 370 MYTLTVLETCVKNCGKPFHVLVCNKEFISELVKLIGPGH**KL 498
           M T+  L+  V+N G+  H      +F++ELV+LI P +  KL
Sbjct: 64  MLTIRALDYLVRNGGEKVHERCGRYKFLNELVRLIAPKYNGKL 106


>Z70684-11|CAA94604.1| 1141|Caenorhabditis elegans Hypothetical
           protein F28D1.10 protein.
          Length = 1141

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SFFPSACSQPFFLIALMASLGPFRTAVXEXRXIFHVS 247
           SF P   S P  L AL+  +GP+   +   R I+HV+
Sbjct: 825 SFMPDHYSDPQELRALVQIIGPYGVKLMTERLIWHVA 861


>Z70682-10|CAA94588.1| 1141|Caenorhabditis elegans Hypothetical
           protein F28D1.10 protein.
          Length = 1141

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SFFPSACSQPFFLIALMASLGPFRTAVXEXRXIFHVS 247
           SF P   S P  L AL+  +GP+   +   R I+HV+
Sbjct: 825 SFMPDHYSDPQELRALVQIIGPYGVKLMTERLIWHVA 861


>AB073210-1|BAB70473.1| 1141|Caenorhabditis elegans rac effector
           protein.
          Length = 1141

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SFFPSACSQPFFLIALMASLGPFRTAVXEXRXIFHVS 247
           SF P   S P  L AL+  +GP+   +   R I+HV+
Sbjct: 825 SFMPDHYSDPQELRALVQIIGPYGVKLMTERLIWHVA 861


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,951,636
Number of Sequences: 27780
Number of extensions: 182522
Number of successful extensions: 384
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2605097262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)