Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B13
(1462 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 35 0.14
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 35 0.19
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 33 0.76
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.76
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 32 1.3
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 31 2.3
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 31 2.3
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 3.1
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 30 4.0
SB_3802| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 30 4.0
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.3
SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 7.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 7.1
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.3
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 35.1 bits (77), Expect = 0.14
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPPXXKXXKXXXGGGGGG 797
GG + PPPP G PPPPPP G GG
Sbjct: 669 GGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPPGFGG 709
Score = 31.5 bits (68), Expect = 1.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 681 GXXXSXPPPPKKXXXGXXPPPPPP 752
G PPPP G PPPPPP
Sbjct: 659 GPPPPPPPPPGGQAGGAPPPPPPP 682
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 34.7 bits (76), Expect = 0.19
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP G PPPPPP
Sbjct: 311 GGAPPPPPPPPPPPPGDGGAPPPPPP 336
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 672 GGGGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP G PPPPPP
Sbjct: 311 GGAPPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 678 GGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP PPPPPP
Sbjct: 286 GGGAPVPPPPPADGSAPAPPPPPPP 310
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPP 752
GGG PPPP PPPPPP
Sbjct: 286 GGGAPV--PPPPPADGSAPAPPPPPP 309
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 681 GXXXSXPPPPKKXXXGXXPPPPPP 752
G + PPPP PPPPPP
Sbjct: 299 GSAPAPPPPPPPGGAPPPPPPPPP 322
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 32.7 bits (71), Expect = 0.76
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPPXXKXXKXXXGGG 788
PPPP G PPPPPP GG
Sbjct: 200 PPPPPGFPGGAPPPPPPPFGAPPPPALNGG 229
Score = 32.3 bits (70), Expect = 1.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 681 GXXXSXPPPPKKXXXGXXPPPPPP 752
G PPPP G PPPPPP
Sbjct: 193 GMPPPPPPPPPPGFPGGAPPPPPP 216
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 32.7 bits (71), Expect = 0.76
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPPXXKXXK 770
PPPP++ PPPPPP + K
Sbjct: 66 PPPPRRGFYDDYPPPPPPPRRDEK 89
Score = 30.7 bits (66), Expect = 3.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP + PPPPPP
Sbjct: 52 PPPPPRFYDNDIPPPPPP 69
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 1.0
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 678 GGXXXSXPPPPKKXXXGXXPPPPPPXXKXXKXXXGG 785
GG S PPPP G PPPPPP GG
Sbjct: 938 GGSAPSQPPPP----GGNAPPPPPPPGGSAPPPGGG 969
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 678 GGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP PPPPPP
Sbjct: 967 GGGAPPLPPPPGGSAPPPPPPPPPP 991
Score = 29.9 bits (64), Expect = 5.3
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -2
Query: 795 PPPPPPXXFXXXXXXXGGGGXXXPPXFFXGGGGEXXTXPPPXXKKKXKK 649
PPPPPP GGG PP GG PPP +K
Sbjct: 953 PPPPPPP--GGSAPPPGGGAPPLPPP--PGGSAPPPPPPPPPPPPPMRK 997
Score = 29.9 bits (64), Expect = 5.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPP 752
GGG PPP PPPPPP
Sbjct: 967 GGGAPPLPPPPGGSAPPPPPPPPPPP 992
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP G PPPPPP
Sbjct: 363 PPPPPPPPVGGPPPPPPP 380
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 702 PPPKKXXXGXXPPPPPP 752
PPP G PPPPPP
Sbjct: 315 PPPPPARMGTAPPPPPP 331
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 31.5 bits (68), Expect = 1.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 678 GGXXXSXPPPPKKXXXGXXPPPPPP 752
GG + PPPP PPPPPP
Sbjct: 296 GGHPAAAPPPPPLPAGVPAPPPPPP 320
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPP 752
GG + PPPP PPPPPP
Sbjct: 296 GGHPAAAPPPPPLPAGVPAPPPPPPP 321
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP G PPPPPP
Sbjct: 758 PPPPAVPGEGARPPPPPP 775
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPP 752
G G PPPP G P PPPP
Sbjct: 378 GAGNGPGGPPPPWSKPGGILPGPPPP 403
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 693 SXPPPPKKXXXGXXPPPPPPXXKXXKXXXGGGG 791
S PPPP G PPPPP GGG
Sbjct: 193 SVPPPPPPGPGGIPPPPPPIRGGVPPPPPMGGG 225
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 702 PPPKKXXXGXXPPPPPPXXKXXKXXXGGGGG 794
PPP G PPPPPP GGG
Sbjct: 195 PPPPPPGPGGIPPPPPPIRGGVPPPPPMGGG 225
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 681 GXXXSXPPPPKKXXXGXXPPPPPP 752
G S PPPP PPPPPP
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPP 383
Score = 30.7 bits (66), Expect = 3.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 693 SXPPPPKKXXXGXXPPPPPP 752
S PPPP+ PPPPPP
Sbjct: 388 SPPPPPQPPPPPPPPPPPPP 407
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 368 PPPPPPPPPSPPPPPPPP 385
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 410 PPPPPPPPPAPPPPPPPP 427
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 383 PPPPPSPPPPPQPPPPPP 400
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 384 PPPPSPPPPPQPPPPPPP 401
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.7 bits (66), Expect = 3.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP + PPPPPP
Sbjct: 205 PPPPPRPPPSPPPPPPPP 222
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 218 PPPPPSPSPPRPPPPPPP 235
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 30.3 bits (65), Expect = 4.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPP 752
G G PPPP PPPPPP
Sbjct: 459 GVGQAPPPPPPPPPPPPPPPPPPPPP 484
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 672 GGGGXXXSXPPPPKKXXXGXXPPPPPP 752
G G PPPP PPPPPP
Sbjct: 459 GVGQAPPPPPPPPPPPPPPPPPPPPPP 485
>SB_3802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 663 FXXGGGGXXXSXPPPPKKXXXGXXPPPPPP 752
+ GGG + PPP G PPPPPP
Sbjct: 160 YKCSGGGEGPNPSPPPS----GAPPPPPPP 185
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 30.3 bits (65), Expect = 4.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPP 752
GGG PPPP P PPPP
Sbjct: 658 GGGMFPPPPPPPPGGGVPGPPKPPPP 683
Score = 29.1 bits (62), Expect = 9.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 672 GGGGXXXSXPPPPKKXXXGXXPPPPP 749
GGG PPPP G PPPP
Sbjct: 658 GGGMFPPPPPPPPGGGVPGPPKPPPP 683
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.9 bits (64), Expect = 5.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPPXXKXXKXXXGG 785
PPPP PPPPPP GG
Sbjct: 867 PPPPPPPPPPPPPPPPPPPASSTGSTPGG 895
>SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 92 PPPPPPQLENDFPPPPPP 109
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PP P+ G PPPPPP
Sbjct: 729 PPSPQPGCAGLPPPPPPP 746
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 742 PPPPPPPGCAGLPPPPPP 759
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 1161 PPPPPPPPSSPSPPPPPP 1178
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 1163 PPPPPPSSPSPPPPPPPP 1180
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 1165 PPPPSSPSPPPPPPPPPP 1182
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 1164 PPPPPSSPSPPPPPPPPP 1181
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 311 PPPPPPEPTSELPPPPPP 328
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP + PPPPPP
Sbjct: 312 PPPPPEPTSELPPPPPPP 329
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPP 749
PPPP G PPPPP
Sbjct: 374 PPPPPPPTNGPPPPPPP 390
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPP 749
PPPP G PPPPP
Sbjct: 384 PPPPPPPTNGPPPPPPP 400
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPP 749
PPPP G PPPPP
Sbjct: 394 PPPPPPPTNGPPPPPPP 410
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,132,166
Number of Sequences: 59808
Number of extensions: 289634
Number of successful extensions: 3034
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1868
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4706848577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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