Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B13
         (1462 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   5.5  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   7.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 5.5
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 735 PPPPPPXXKXXKXXXGGGGGG 797
           PPPPPP         GG  GG
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGG 605



 Score = 24.2 bits (50), Expect = 9.6
 Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
 Frame = -1

Query: 796 PPPPPPXXXXXXFXXGG--GG--GGXXPXXXFXGGGG 698
           PPPPPP         GG  GG  G   P     G GG
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGG 621


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 7.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 708  GGGGEXXTXPPPXXKKKXKKKKXXFXXGG 622
            G GGE  +  P   K+K +KK      GG
Sbjct: 924  GSGGEEGSGAPKERKRKGEKKPRKSQGGG 952


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,128
Number of Sequences: 2352
Number of extensions: 11064
Number of successful extensions: 47
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 170279505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)