Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B13
(1462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.22
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.22
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.22
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 33 0.51
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 33 0.51
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.89
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.89
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 32 1.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.6
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 2.1
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 3.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.6
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 30 4.7
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 6.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 8.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 8.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 8.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 8.3
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.22
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 678 GGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP G PPPPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.67
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 672 GGGGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP G PPPPPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPP 749
GG PPPP G PPPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.22
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 678 GGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP G PPPPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.67
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 672 GGGGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP G PPPPPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPP 749
GG PPPP G PPPPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.22
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 678 GGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP G PPPPPP
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 32.7 bits (71), Expect = 0.67
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 672 GGGGXXXSXPPPPKKXXXGXXPPPPPP 752
GG PPPP G PPPPPP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPP 749
GG PPPP G PPPPP
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPP 373
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 33.1 bits (72), Expect = 0.51
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPP 752
GGG P PP G PPPPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPPP 679
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 660 FFXXGGGGXXXSXPPPPKKXXXGXXPPPPPP 752
++ GGG PPP PPPPPP
Sbjct: 650 WYGSGGGSSMPMPVPPPGGLGGFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 33.1 bits (72), Expect = 0.51
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPP 752
GGG P PP G PPPPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPPP 679
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 660 FFXXGGGGXXXSXPPPPKKXXXGXXPPPPPP 752
++ GGG PPP PPPPPP
Sbjct: 650 WYGSGGGSSMPMPVPPPGGLGGFMPPPPPPP 680
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.89
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -1
Query: 796 PPPPPPXXXXXXFXXGGGGGGXXPXXXFXGGGG 698
PPPPPP GGGGGG GGGG
Sbjct: 54 PPPPPPACGG---GCGGGGGGCGGGGGGCGGGG 83
Score = 32.3 bits (70), Expect = 0.89
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -1
Query: 796 PPPPPPXXXXXXFXXGGGGGGXXPXXXFXGGGG 698
PPPPPP GGGGGG GGGG
Sbjct: 111 PPPPPPACGG---GCGGGGGGCGGGCGGGGGGG 140
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.89
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP+K G PPPPP
Sbjct: 125 PPPPRKSRAGGSSPPPPP 142
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPP K G PPPPPP
Sbjct: 126 PPPRKSRAGGSSPPPPPP 143
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 663 FXXGGGGXXXSXPPPPKKXXXGXXPPPPP 749
F GGGG PPPP G PPP
Sbjct: 19 FPSGGGGGCGCAPPPPPACGCGGGAAPPP 47
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP G PPPPPP
Sbjct: 578 PPPPPPPMLGGPPPPPPP 595
Score = 31.9 bits (69), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP G PPPPPP
Sbjct: 579 PPPPPPMLGGPPPPPPPP 596
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPP 581
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP G PPPPPP
Sbjct: 336 PPPPGMRYPGGMPPPPPP 353
Score = 29.5 bits (63), Expect = 6.3
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 843 PPXXXXXXXGXGXXXXPPPPPPXXFXXXXXXXGGGGXXXPPXFFXGGGGEXXTXPPP 673
PP G PPPPPP F G GG PP G PPP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRF----GPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPP 304
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 663 FXXGGGGXXXSXPPPPKKXXXGXXPPPPP 749
F G G PPP + G PPPPP
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP G PPPPPP
Sbjct: 346 PPPPGMRYPGGMPPPPPP 363
Score = 29.5 bits (63), Expect = 6.3
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 843 PPXXXXXXXGXGXXXXPPPPPPXXFXXXXXXXGGGGXXXPPXFFXGGGGEXXTXPPP 673
PP G PPPPPP F G GG PP G PPP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRF----GPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPP 314
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 663 FXXGGGGXXXSXPPPPKKXXXGXXPPPPP 749
F G G PPP + G PPPPP
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = +3
Query: 672 GGGGXXXSXP----PPPKKXXXGXXPPPPPP 752
GGGG + P PPP PPPPPP
Sbjct: 28 GGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
Frame = +3
Query: 645 FFFXXFFXXGGGGXXX------SXPPPPKKXXXGXXPPPPPP 752
F F GGGG + PPPP PPPPPP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = -2
Query: 816 GXGXXXXPPPPPPXXFXXXXXXXGGGG---XXXPPXFFXGGGGEXXTXPPP 673
G G PPPPPP GGGG PP GG PPP
Sbjct: 24 GGGCGCAPPPPPP----SPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPP 70
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPPXXKXXKXXXG 782
PPPP PPPPPP K G
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPPTMSKAPTG 1371
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.9 bits (64), Expect = 4.7
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 816 GXGXXXXPPPPPPXXFXXXXXXXGGGGXXXPPXFFXGGGG 697
G G PPPPPP GGGG PP + G
Sbjct: 24 GGGCGCAPPPPPP----ACGCGGGGGGYAAPPPAYAAPAG 59
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 6.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 726 GXXPPPPPPXXKXXKXXXGGGGG 794
G PPPPPP GGGG
Sbjct: 533 GPPPPPPPPRSSGANGNRNGGGG 555
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +3
Query: 663 FXXGGGGXXXSXPPPPKKXXXGXXPPPPPPXXKXXKXXXGGGGG 794
+ GGGG + PPPP P P P GG
Sbjct: 29 YSGGGGGGGDAAPPPPPPADAAPAPAPAPEPEAAPAAPAADAGG 72
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 675 GGGXXXSXPPPPKKXXXGXXPPPPPPXXKXXKXXXGG 785
G G S PPPP+ G PPPP + + GG
Sbjct: 763 GAGPMSSFPPPPR---GGMHHMPPPPSFRGGRGGHGG 796
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 539 PPPPPVGMANGGPPPPPP 556
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPP 813
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 235 PPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 699 PPPPKKXXXGXXPPPPPP 752
PPPP PPPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPP 238
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 816 GXGXXXXPPPPPPXXFXXXXXXXGGGGXXXPPXFFXGGG 700
G G PPPPPP GG P GGG
Sbjct: 24 GGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGG 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,685,900
Number of Sequences: 27780
Number of extensions: 313294
Number of successful extensions: 4275
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2657
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4183484556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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