Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B11
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0771 + 6453130-6454488 40 0.003
11_01_0767 + 6438648-6438809,6439146-6440000 35 0.075
11_01_0750 - 6315126-6315896,6316371-6316784 32 0.53
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 30 2.1
11_02_0012 - 7346282-7347136,7347234-7347593 29 3.7
11_02_0011 - 7337618-7338496,7338596-7338991 29 3.7
01_01_1152 + 9170628-9171899 29 4.9
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421... 29 6.5
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 29 6.5
11_04_0468 + 18059024-18059108,18059161-18059253,18059408-180596... 28 8.6
02_04_0385 + 22514619-22514703,22514756-22514848,22515003-225152... 28 8.6
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 28 8.6
>11_01_0771 + 6453130-6454488
Length = 452
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 625 PATAVAMFNVIFFQGHWHVPFNASETEXK 711
P TAV + N I+F+G W PFN S+TE K
Sbjct: 200 PETAVVLGNAIYFKGKWDRPFNESDTERK 228
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 35.1 bits (77), Expect = 0.075
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +1
Query: 649 NVIFFQGHWHVPFNASETEXKDSXFDEKTIIKKPTMRLLQSLFYTENEXLGAKMIELPYK 828
N I+F+G W PF+ S+T ++ + + ++ P M+ ++ G +++ LPYK
Sbjct: 93 NAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYK 152
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 32.3 bits (70), Expect = 0.53
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +3
Query: 384 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADII 557
+L R P+ L A ++ L+ F A N++ S +F + P++A D I
Sbjct: 88 VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146
Query: 558 NRWADEQTQGHIKTPVSEDKIDPRHG 635
N W + T+G + T + ID G
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTG 172
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 366 TLEPPLPQGFPLSLPWTVHRLQTRNK 289
+L PPLP G PLS P+ QT K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +1
Query: 631 TAVAMFNVIFFQGHWHVPFNASETEXKDSXFDEKTIIKKPTMRLLQSLFYTENEXLGAKM 810
TA+ + N I+F+G W PF T + + + P M + + + G K+
Sbjct: 153 TALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSREDQYIGFYD--GFKV 210
Query: 811 IELPY 825
++LPY
Sbjct: 211 LKLPY 215
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 631 TAVAMFNVIFFQGHWHVPFNASETEXKDSXFDEKTIIKKPTMRLLQSLFYTENEXLGAKM 810
TA+ + N I+F+G W PF S T + + + P M + + ++ G +
Sbjct: 165 TALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIGFHD--GFTV 222
Query: 811 IELPY 825
++LPY
Sbjct: 223 LKLPY 227
>01_01_1152 + 9170628-9171899
Length = 423
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +1
Query: 628 ATAVAMFNVIFFQGHWHVPFNASETEXKDSXFDEKTIIKKPTMRLLQSLFYTENEXLGAK 807
+T V + N + F+G W +PF+ S T + ++ P M G
Sbjct: 187 STVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFT 246
Query: 808 MIELPYK 828
++LPYK
Sbjct: 247 ALKLPYK 253
>05_05_0034 - 21741148-21741275,21741890-21741928,21742007-21742121,
21742227-21742292,21743213-21743371,21743573-21743609,
21743757-21744194,21744735-21744817,21744920-21744956,
21745146-21745214,21745316-21745407,21745481-21745565,
21745903-21745982,21746327-21746724,21746813-21747717,
21747825-21747915,21748617-21750680,21750681-21750749,
21750850-21751273,21751644-21751763
Length = 1832
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = -1
Query: 634 PWRGSILSSLTGVFMCP*VC---SSAQRLMISAAF 539
PW+GS++ S+ GVF+ V SS+ + ++A+F
Sbjct: 899 PWKGSVVDSVVGVFLTQNVADHLSSSAYMALAASF 933
>05_05_0030 - 21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = -1
Query: 634 PWRGSILSSLTGVFMCP*VC---SSAQRLMISAAF 539
PW+GS++ S+ GVF+ V SS+ + ++A+F
Sbjct: 910 PWKGSVVDSVVGVFLTQNVADHLSSSAYMALAASF 944
>11_04_0468 +
18059024-18059108,18059161-18059253,18059408-18059661,
18059783-18059995,18060081-18060173,18060617-18060721,
18060806-18061150
Length = 395
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 239 DDKNVIASPL-GVMXXXXXXRVWSRCTVQGRDKGNPWGRGGSRVNTHIR 382
DD ++A + G+ ++ + V+ RD+GN GRG R+N R
Sbjct: 35 DDNTLVADVVDGITQHGDHNQITNEGGVERRDRGNNMGRGLQRLNRACR 83
>02_04_0385 +
22514619-22514703,22514756-22514848,22515003-22515256,
22515378-22515590,22515676-22515768,22516213-22516317,
22516402-22516710,22517648-22517717,22518008-22518102,
22519143-22519361
Length = 511
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 239 DDKNVIASPL-GVMXXXXXXRVWSRCTVQGRDKGNPWGRGGSRVNTHIR 382
DD ++A + G+ ++ + V+ RD+GN GRG R+N R
Sbjct: 35 DDNTLVADVVDGITQHGDHNQITNEGGVERRDRGNNMGRGLQRLNRACR 83
>01_06_1263 +
35840502-35841308,35841763-35841969,35842272-35842370,
35843361-35843464,35844521-35844698,35844774-35845244,
35845383-35845523,35846290-35846349,35846427-35846490,
35847295-35847524,35847606-35847704
Length = 819
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +1
Query: 337 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 516
K+ +G L +++ + + + +N T + S K P S S RSP +R S +
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434
Query: 517 TLTSALRRMPLISSTVGRTN 576
++ LIS +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,722,126
Number of Sequences: 37544
Number of extensions: 503407
Number of successful extensions: 1371
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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