Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B11
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 40 0.003
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 40 0.003
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 33 0.36
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 33 0.36
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 29 5.8
Z72515-4|CAA96685.1| 288|Caenorhabditis elegans Hypothetical pr... 28 7.7
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 28 7.7
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 28 7.7
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Frame = +3
Query: 306 AGAQSKEEIREILGGGEAQEST--HTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF 479
A ++++EIR+ L G E H + + VAN I+ + + +
Sbjct: 52 AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111
Query: 480 -SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDKI 620
+ L+ + +NF + +A+ IN + E T+GHIK ++ D I
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSI 159
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Frame = +3
Query: 306 AGAQSKEEIREILGGGEAQEST--HTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF 479
A ++++EIR+ L G E H + + VAN I+ + + +
Sbjct: 52 AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111
Query: 480 -SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDKI 620
+ L+ + +NF + +A+ IN + E T+GHIK ++ D I
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSI 159
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 643 MFNVIFFQGHWHVPF-NASETEXKDSXFDEKTIIKKPTMRLLQSLFYTENEXLGAKMIEL 819
+ N IFFQG W F +E+ S + + + P +R + FY +++ ++I +
Sbjct: 163 LINAIFFQGDWRRKFGEPAESNFSISATENRLV---PMLRETRDYFYNKDDEW--QVIGI 217
Query: 820 PYKEPXFRMVVVCPTK 867
P+K+ + PT+
Sbjct: 218 PFKDKSAWFAIFLPTR 233
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 643 MFNVIFFQGHWHVPF-NASETEXKDSXFDEKTIIKKPTMRLLQSLFYTENEXLGAKMIEL 819
+ N IFFQG W F +E+ S + + + P +R + FY +++ ++I +
Sbjct: 163 LINAIFFQGDWRRKFGEPAESNFSISATENRLV---PMLRETRDYFYNKDDEW--QVIGI 217
Query: 820 PYKEPXFRMVVVCPTK 867
P+K+ + PT+
Sbjct: 218 PFKDKSAWFAIFLPTR 233
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 89 TVMDKLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPL 268
T DK LV + FG+ FS RLG+ ++K L+ + N+A KN + + L
Sbjct: 319 TFFDKFYQSNVLVVRRKQPTYFGNLFSTARLGELLEKNHLE-YGRNINIAQYKNGVRTTL 377
>Z72515-4|CAA96685.1| 288|Caenorhabditis elegans Hypothetical
protein T11A5.5 protein.
Length = 288
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 559 TVGRTNRLKDT*RLLSAKTKLTPATAVAMFNVIFFQGHWHVPFNASETE 705
TVG T + + ++S+ T + + +F ++F GH + F +SE +
Sbjct: 13 TVGSTAHIIPSLHIMSSITVFSVILILTIFPLVFTSGHLRLEFTSSENK 61
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 28.3 bits (60), Expect = 7.7
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Frame = +3
Query: 285 FPCYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYA-EFDPKFLTVANKIYVSD 455
+ YE+ G +++ +I + L + + TH + A + DP+ + + N I +
Sbjct: 38 YSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNVSTALSAMKKDPQ-VKICNHIICRN 95
Query: 456 QYKLAD-AFSRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIK---TPVSEDK 617
K + L+ EV + + K IN+ E T GHIK T +S DK
Sbjct: 96 GIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDK 153
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 28.3 bits (60), Expect = 7.7
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Frame = +3
Query: 285 FPCYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYA-EFDPKFLTVANKIYVSD 455
+ YE+ G +++ +I + L + + TH + A + DP+ + + N I +
Sbjct: 37 YSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNVSTALSAMKKDPQ-VKICNHIICRN 94
Query: 456 QYKLAD-AFSRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIK---TPVSEDK 617
K + L+ EV + + K IN+ E T GHIK T +S DK
Sbjct: 95 GIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDK 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,765,435
Number of Sequences: 27780
Number of extensions: 412350
Number of successful extensions: 1088
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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