Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B10
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0222 + 26510472-26511698                                         29   3.9  
10_03_0029 + 7196149-7196213,7196303-7196424,7197616-7197822,719...    29   6.8  

>05_06_0222 + 26510472-26511698
          Length = 408

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -3

Query: 279 DGSKWLVFSDASF--LVRCLPTRGP*KCA 199
           D  KWL   +A F  L RCLP RGP KC+
Sbjct: 376 DNGKWL---EAPFIRLDRCLPERGPSKCS 401


>10_03_0029 +
           7196149-7196213,7196303-7196424,7197616-7197822,
           7197904-7198091,7198493-7198628,7198973-7199069,
           7199200-7199300,7199644-7199807,7200029-7200217,
           7200590-7200711,7200961-7200979
          Length = 469

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 150 QKHSLTNTNYYNF-DHDKHIFTGHGWVSSAPRKKRLKTPTTSIRPGHSRK 296
           +K+ +   N +N  D +      H   S+AP K   +T ++ ++  H RK
Sbjct: 107 EKYEINGENEFNVSDSEMEELVSHEEASAAPSKSSFETDSSDVKIEHKRK 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,479,276
Number of Sequences: 37544
Number of extensions: 347252
Number of successful extensions: 747
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)