Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B10
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z34800-4|CAA84323.2|  441|Caenorhabditis elegans Hypothetical pr...    30   2.7  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    29   6.2  
U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
           protein F12F6.6 protein.
          Length = 1126

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 493 EDGATHPEPFPSGYPAIGVPPFVXANS 413
           +D +T    FP+GYP   +PP V  NS
Sbjct: 367 DDSSTRSGIFPTGYPNAELPPLVSTNS 393


>Z34800-4|CAA84323.2|  441|Caenorhabditis elegans Hypothetical
           protein F45H7.4 protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 256 FRRFFLGALLTHPWPVKMCLSWSKL 182
           F+R  L A+L HPW  +  LSW  L
Sbjct: 271 FQRCSLEAILNHPWVKQQTLSWDAL 295


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -2

Query: 508 PIEXSEDGATHPEP--FPSGYPAIGVPP 431
           P+E    GA +  P  +P+GYP  G+PP
Sbjct: 92  PMEWRPPGAEYQMPPGYPAGYPPYGMPP 119


>U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical
           protein K06A1.6 protein.
          Length = 937

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -1

Query: 470 TIPFGVSRNRRPSLCXGKLQL 408
           TIP+G S + +PS C GK+++
Sbjct: 663 TIPWGESSDNKPSCCDGKVEV 683


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,690,605
Number of Sequences: 27780
Number of extensions: 293184
Number of successful extensions: 580
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)