BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_B08 (865 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 62 6e-10 SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10 SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08 SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 45 9e-05 SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 43 3e-04 SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.69 SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2 SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 30 2.8 SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7 >SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) Length = 569 Score = 62.1 bits (144), Expect = 6e-10 Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 3/222 (1%) Frame = +3 Query: 150 LKQALIHKPKMQLGVXVLPNVNSTI--YHDVPAIINLVDYVNVGAYDYYTPTRNNKEADY 323 L+ A ++P++ L V +TI ++V I ++D +N+ AYD E + Sbjct: 281 LEAAQTNRPRLLLTAAVAAG-KATIDKAYEVDKIGQILDLINLMAYDLRGMWE--PETGH 337 Query: 324 TAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHT 503 + P A YW+ GAP+ KI L + T+GR +KL AD G+ Sbjct: 338 HTALEGPPGEE--LTVSFAAQYWIDKGAPASKIALGLGTYGRAFKL-ADQTRHGL-KAPA 393 Query: 504 DGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNG 683 +G G Y + G L+Y E+C + +L+ + S A + P + Sbjct: 394 NGNPTRGQYTREPGFLAYYEIC------------KMNLQVTSTESS-----AVKAPYGH- 435 Query: 684 XGGIWVSYEDPDTAGQKA-AYVKSKNLGGVAIVDLSLDDFRG 806 G +WV Y+D + K +K+K + G + LDDF+G Sbjct: 436 VGDLWVGYDDEYSLSLKVERVIKAKGMAGAMFWAIPLDDFKG 477 >SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 438 Score = 62.1 bits (144), Expect = 6e-10 Identities = 52/193 (26%), Positives = 83/193 (43%) Frame = +3 Query: 228 HDVPAIINLVDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGA 407 +++ A+ +D++N+ +YD + + + A +PL AV W+ G Sbjct: 195 YEISALGQALDWINLMSYDLHGDWEDTT-GHHAA--MDSSTGDPL-TVTHAVDLWIAGGM 250 Query: 408 PSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINP 587 PS KI L I +GR++ L ++ P G GPY K G ++Y E+C Sbjct: 251 PSNKIALGIPLYGRSFTLKTANKTLDAPAT----KGGQGPYTKEAGYIAYFEIC------ 300 Query: 588 NQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGXGGIWVSYEDPDTAGQKAAYVKSKNLGG 767 + G+ VT Y D N WV Y+D + +K Y+K K+L G Sbjct: 301 --KMGL-----SVTRDPVLVSPYGV---DVNNQ---WVGYDDVTSVQEKVNYIKKKSLLG 347 Query: 768 VAIVDLSLDDFRG 806 + LDDF+G Sbjct: 348 AMFWAMDLDDFKG 360 >SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 807 Score = 56.4 bits (130), Expect = 3e-08 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 2/218 (0%) Frame = +3 Query: 153 KQALIHKPKMQLGVXVLPNVNST-IYHDVPAIINLVDYVNVGAYDYYTPTRNNKEADYTA 329 K A KP+M L V + ++V + ++D++N+ YD + P +TA Sbjct: 551 KAADTDKPRMLLTAAVSAGHGTVDAAYEVHKLAGILDWINLMTYDLHGPWEPYT-GHHTA 609 Query: 330 PIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDG 509 + P ++ AV YW+ G P KI L +A +G ++L ++ A P + + Sbjct: 610 LVGPPGDK---LTVSYAVKYWMEKGMPCGKIALGMANYGHAFELSDPTKTALGAPANVN- 665 Query: 510 PGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPHLRKVTD-PSKRFGTYAFRLPDDNGX 686 G + PY E+C KL L KVTD P+K Y + Sbjct: 666 KGRSYPYY---------ELC-KL-----------PLTKVTDNPAK--APYGYH------- 695 Query: 687 GGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDDF 800 G W++Y+D + G+K +K +NL G + LDDF Sbjct: 696 GSQWIAYDDVTSLGRKVELIKKENLLGAMFWAIDLDDF 733 >SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) Length = 184 Score = 44.8 bits (101), Expect = 9e-05 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 1/103 (0%) Frame = +3 Query: 504 DGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNG 683 +G GPY + G LSY E+C + + K M+ TD S+ Y + D Sbjct: 10 NGNPPRGPYTRESGFLSYYEICDMM---PKMKTMK------TDQSEVRAPYGYVKQD--- 57 Query: 684 XGGIWVSYEDPDTAGQKA-AYVKSKNLGGVAIVDLSLDDFRGS 809 +WV Y+D + K +K+K L G L LDDF GS Sbjct: 58 WADVWVGYDDERSLQLKVEEVIKAKGLAGAMFWALDLDDFDGS 100 >SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) Length = 829 Score = 43.2 bits (97), Expect = 3e-04 Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 8/201 (3%) Frame = +3 Query: 228 HDVPAIINLVDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRN-P------LQNADAAVT 386 +D+ I +D++NV YD + T K +TA P + N D Sbjct: 584 YDIEGISKPLDWINVMTYDLH-GTWEPKTGHHTAMGPDGDKLTLPFAIWYWMNNRDTWEK 642 Query: 387 YWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEV 566 + +G P+ KIVL + T+GR + L E AG + +AG Y +G L+Y E+ Sbjct: 643 PGIRNGMPANKIVLGLGTYGRAFGL----ESAG------NNGLDAGKYTGAKGFLAYFEI 692 Query: 567 CGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGXGGIWVSYEDPDTAGQKAAYV 746 C + G+ V + +K Y ++ G WV +++P + K V Sbjct: 693 C--------KMGL-----TVVENNKAKAPYGYK-------GHDWVGFDNPKSLIYKIDNV 732 Query: 747 KSKN-LGGVAIVDLSLDDFRG 806 KN L GV + LDDF G Sbjct: 733 VKKNQLRGVMFWAIDLDDFSG 753 Score = 33.9 bits (74), Expect = 0.17 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 1/97 (1%) Frame = +3 Query: 519 AGPYVKTEGLLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGXGGIW 698 +G Y EG L+Y E+C ++G+ V +K Y ++ D W Sbjct: 280 SGKYTDAEGFLAYYEIC--------KRGLT-----VVHKNKANAPYGYKGKD-------W 319 Query: 699 VSYEDPDTAGQKAAYVKSKN-LGGVAIVDLSLDDFRG 806 + ++DP++ K V KN L GV + LDDF G Sbjct: 320 IGFDDPNSLVYKIDNVVKKNQLRGVMFWAIDLDDFSG 356 >SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1448 Score = 31.9 bits (69), Expect = 0.69 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Frame = +3 Query: 540 EGLLSYPEVCGKLINPNQQKGMRPHLRKVTDP-------SKRFGTYAFRLPDDNGXGGIW 698 E +P C N + +G++ + K+TD SK T+ F+ P D I Sbjct: 273 ENSSDHPGECNSTSNRSSAEGIK-NTNKITDTKSMVEKESKSAKTF-FKKPSDLDSNCII 330 Query: 699 VSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDDFRGSLYRRQVSNPXGR*IPS 857 ++D + Q + L A++D S +DFR + V++P +PS Sbjct: 331 PDFKDCSSTNQTERVEEKGALIKKAMIDSSREDFRDQAHGEHVTHPIKWLVPS 383 >SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 336 Score = 31.1 bits (67), Expect = 1.2 Identities = 23/75 (30%), Positives = 34/75 (45%) Frame = +2 Query: 296 DTQQQRS*LHSSYLHPTKSQPTAERRRRCHILAHERCSKPKDSIVYRDLRSYLETGR*QR 475 + + + S +H L P + ++RRR H AH R S+ + R + R +R Sbjct: 185 EEEHKESPVHHRSLSPEPRRGYRDQRRRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRR 244 Query: 476 NCGSPSNPH*WSRRS 520 SPS PH S RS Sbjct: 245 RSRSPS-PHHRSHRS 258 >SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) Length = 367 Score = 29.9 bits (64), Expect = 2.8 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -1 Query: 817 RYRDPRKSSNDR-STIATPPRFXDLT*AAFWPAVSGSSYDTQMPPSPLSSGRRK 659 ++R KS++DR TI P F D + A V+G ++MPP G++K Sbjct: 34 KHRKTTKSTDDRCGTINRWPTFLDNSFAFIAAEVNGLESCSKMPPKKKGKGKKK 87 >SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 591 Score = 29.5 bits (63), Expect = 3.7 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +3 Query: 654 YAFRLPDDNGXGGIWVSYEDPDTAGQKAAYVKSKNLGGVAI 776 + ++ PD + G V+YEDP TA + K+ G +I Sbjct: 208 WIYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFMGQSI 248 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 27,481,785 Number of Sequences: 59808 Number of extensions: 601192 Number of successful extensions: 1660 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1445 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1657 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2467263854 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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