Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B08
         (865 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   0.90 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   0.90 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   0.90 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   2.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.4  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 315 ADYTAPIYTPQNRNPLQNADAAVTYWLTSGAP 410
           A +TAPIYT + +  +++ + A  ++  S AP
Sbjct: 505 AGWTAPIYTLKRKGLIKSENEAADFFSGSCAP 536


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 315 ADYTAPIYTPQNRNPLQNADAAVTYWLTSGAP 410
           A +TAPIYT + +  +++ + A  ++  S AP
Sbjct: 505 AGWTAPIYTLKRKGLIKSENEAADFFSGSCAP 536


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 315 ADYTAPIYTPQNRNPLQNADAAVTYWLTSGAP 410
           A +TAPIYT + +  +++ + A  ++  S AP
Sbjct: 505 AGWTAPIYTLKRKGLIKSENEAADFFSGSCAP 536


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
 Frame = +3

Query: 426 LSIATFGRTWKLDADSEIAGVP---------PIHTDGPGEAGPYVKTEGL 548
           LSI + G  W++   SE   +P         P+H  G    GP V   G+
Sbjct: 33  LSIYSGGSDWRVAGRSESVVIPGDIVLGGLFPVHEKGGASCGPNVYNRGV 82


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 345 VGCK*ELCNQLLCCCVSE 292
           +GC+ + CN    CC ++
Sbjct: 433 IGCECKTCNSKTKCCFAQ 450


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,862
Number of Sequences: 438
Number of extensions: 5247
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)