Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B07
         (1116 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    46   0.002
UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    44   0.007
UniRef50_Q9M7Y1 Cluster: F3E22.11 protein; n=1; Arabidopsis thal...    34   7.6  
UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma j...    34   7.6  

>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 46.0 bits (104), Expect = 0.002
 Identities = 36/95 (37%), Positives = 37/95 (38%), Gaps = 8/95 (8%)
 Frame = -2

Query: 911 FFFFXXXXXXXXXXPXPPPPXGXXKXFFF--FXXXXPPXXGGGGXXFFFFXXXXXGXFXX 738
           FFFF            PPPP    K FFF  F    PP  GGGG   FF+     G    
Sbjct: 31  FFFFLGGGREGGGGAPPPPPARRQKFFFFPHFFFPPPPRRGGGG--VFFYKKKRGG--PP 86

Query: 737 XPP------XXXFXPPPPPXGGXXXXXAXFFXGGG 651
            PP         F PPPPP          FF GGG
Sbjct: 87  PPPTTQKKKNFFFSPPPPP-----SFWGXFFGGGG 116


>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
            Ruminococcus torques ATCC 27756|Rep: Putative
            uncharacterized protein - Ruminococcus torques ATCC 27756
          Length = 159

 Score = 44.0 bits (99), Expect = 0.007
 Identities = 37/118 (31%), Positives = 37/118 (31%), Gaps = 2/118 (1%)
 Frame = -2

Query: 1052 FFFFFXXXXXXXXFXXKXXPPPXXXXXXKXXFFXXXXXXXGXXXFFFFFFFXXXXXXXXX 873
            FFFFF        F     PPP      K  FF       G   FFFFF           
Sbjct: 49   FFFFFPRGEKIFFFGGGAPPPPPPLKKKKKIFFFFFKKRGGGGGFFFFF----------- 97

Query: 872  XPXPPPPXGXXKXFFFFXXXXPPXXGGGGXXFFFFXXXXXGXFXXXPP--XXXFXPPP 705
               PPP       FFFF           G   FFF     G F   PP     F PPP
Sbjct: 98   ---PPPQQNPPPFFFFFL----------GFFLFFFKKRGGGGFSPPPPKKKKIFFPPP 142



 Score = 41.5 bits (93), Expect = 0.038
 Identities = 29/83 (34%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
 Frame = -3

Query: 958 FXFXXXXXXXXXFFFFFFF--XXXXXXXXXXXPXPPPPXXXKXXFFFXXXXXPXXGGGGG 785
           F F          FFFFFF             P PPPP   K   FF         GGGG
Sbjct: 35  FFFSKKKKKRGCLFFFFFFPRGEKIFFFGGGAPPPPPPLKKKKKIFFFFF---KKRGGGG 91

Query: 784 XXFFFFXPXXXGXXXXXPPXXFF 716
             FFFF P         PP  FF
Sbjct: 92  GFFFFFPPPQQN----PPPFFFF 110


>UniRef50_Q9M7Y1 Cluster: F3E22.11 protein; n=1; Arabidopsis
           thaliana|Rep: F3E22.11 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 147

 Score = 33.9 bits (74), Expect = 7.6
 Identities = 17/57 (29%), Positives = 20/57 (35%)
 Frame = -1

Query: 867 PPPPPPGXXKXXFFFXXXXPPXXGGGGVXXFFFFXXXXXXXXXXPPXXXFFXPPPPP 697
           PPPPPP        +    PP    GGV     +          PP    +  PPPP
Sbjct: 51  PPPPPPSSSGGGGSYYYSPPPPSSSGGVKYPPPYGGDGYGGYYPPPYYGNYGTPPPP 107


>UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC03138 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 156

 Score = 33.9 bits (74), Expect = 7.6
 Identities = 28/79 (35%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
 Frame = -2

Query: 863 PPPPXGXX--KXFFFFXXXXPPXXGGGGXXFFFFXXXXXGXF----XXXPPXXXFXPPPP 702
           P PP G      FFFF    PP    GG  FF+        F       PP     PPPP
Sbjct: 2   PHPPWGVPFWGGFFFFRGVFPPR---GGPLFFYGAPPPPPPFFFNKKKRPPPPPGGPPPP 58

Query: 701 PXGGXXXXXAXFF--XGGG 651
             GG       FF   GGG
Sbjct: 59  FGGGGFPPFFHFFPPPGGG 77


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,977,218
Number of Sequences: 1657284
Number of extensions: 13126576
Number of successful extensions: 51908
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43796
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 109373797567
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)