Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B07
         (1116 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536...    30   3.8  
10_07_0125 - 13096520-13097200,13098209-13098898                       29   6.7  
02_01_0062 - 448105-448145,448780-448866,449664-449790                 29   6.7  
02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108           29   8.8  

>03_02_0067 +
           5364713-5364936,5365513-5367016,5367207-5368250,
           5368467-5368577,5368997-5369068,5369719-5369737,
           5369838-5371142,5371317-5371397,5372441-5372604,
           5373363-5373466,5373537-5373628,5374079-5374216,
           5374370-5374426,5374820-5375046
          Length = 1713

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 767 KKKKXXTPPPPXXGGXXXXKKKXXFXXPGGGGGG 868
           ++++  +PPP   G       K  F   GGGGGG
Sbjct: 17  RRRRSQSPPPAGEGPSEPKLSKLRFGCGGGGGGG 50


>10_07_0125 - 13096520-13097200,13098209-13098898
          Length = 456

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 16/58 (27%), Positives = 17/58 (29%)
 Frame = -1

Query: 864 PPPPPGXXKXXFFFXXXXPPXXGGGGVXXFFFFXXXXXXXXXXPPXXXFFXPPPPPXG 691
           PPPPP   +         P    GGG                 P    F  P PPP G
Sbjct: 2   PPPPPPSVRTRSVTSVALPTHGDGGGCRRVPLSPFDAYWVALPPVRRVFLFPSPPPFG 59


>02_01_0062 - 448105-448145,448780-448866,449664-449790
          Length = 84

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = -1

Query: 867 PPPPPPGXXKXXFFFXXXXPPXXGGGG 787
           PPPPPP      FF     PP  GGGG
Sbjct: 18  PPPPPP-----PFFPPQWAPPVPGGGG 39


>02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108
          Length = 139

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = -1

Query: 867 PPPPPPGXXKXXFFFXXXXPPXXGGGG 787
           PPPPPP      FF     PP  GGGG
Sbjct: 36  PPPPPP------FFPPQWAPPVAGGGG 56


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,965,159
Number of Sequences: 37544
Number of extensions: 643400
Number of successful extensions: 4785
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4165
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3363032448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)