Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B07
         (1116 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   9.4  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 3.1
 Identities = 21/73 (28%), Positives = 25/73 (34%)
 Frame = +3

Query: 699  GGGGGXKXXXGGXXXKXPXXXGXKKKKXXPPPPPXXGXXXXKKKKXFXXXXGGGGXGXXX 878
            GGGGG     G    K     G KK      P    G    +K+K      G GG     
Sbjct: 920  GGGGGSGGEEGSGAPKERKRKGEKK------PRKSQGGGGSRKRKE-KARRGSGGDSDSE 972

Query: 879  XXXXXXXKKKKKK 917
                   +K+KKK
Sbjct: 973  EEEGEGSRKRKKK 985



 Score = 25.0 bits (52), Expect = 4.1
 Identities = 20/73 (27%), Positives = 25/73 (34%)
 Frame = +1

Query: 700  GGGGGKKXXXGGXXXXXPXXXXKKKKXXNPPPPXXGGXXXXKKKXXFXXPXGGGGXGXXX 879
            GGGGG     G           +K+K    P    GG    K+K       G GG     
Sbjct: 920  GGGGGSGGEEGSGAPKE-----RKRKGEKKPRKSQGGGGSRKRKEKARR--GSGGDSDSE 972

Query: 880  XXXXXXXKKKKKK 918
                   +K+KKK
Sbjct: 973  EEEGEGSRKRKKK 985


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 806 GGXXXXKKKXXFXXPGGGGGG 868
           GG      K  F  P GGGGG
Sbjct: 513 GGGRAEGDKVTFQIPNGGGGG 533


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,059
Number of Sequences: 2352
Number of extensions: 11328
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 125796294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)