BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B06
(934 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 167 1e-41
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 167 1e-41
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 143 2e-34
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 142 5e-34
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 139 3e-33
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 138 4e-33
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 133 2e-31
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 130 1e-30
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 130 1e-30
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 130 1e-30
10_01_0066 + 848523-849269,849520-849741 119 3e-27
10_01_0065 + 845447-846187,846969-847193 119 3e-27
04_01_0350 - 4610444-4610668,4612181-4612969 117 2e-26
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 111 6e-25
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 111 6e-25
05_05_0084 - 22262007-22262300,22262435-22262707,22263418-222634... 58 1e-08
07_01_0316 + 2226010-2226256,2226956-2227047,2227143-2227180,222... 35 0.081
08_02_0037 + 11480213-11481013,11483612-11483707 34 0.14
10_08_0021 + 14217455-14217505,14217742-14217909,14219137-142193... 33 0.32
03_02_0970 + 12805537-12806253 33 0.43
03_05_0299 + 22887603-22887797,22887891-22887986,22888089-228881... 32 0.57
03_03_0275 + 16102248-16102263,16102393-16102811 32 0.57
05_06_0098 + 25560158-25560925 31 1.7
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 30 2.3
04_01_0154 - 1775693-1775942,1776834-1777588 30 2.3
01_05_0718 - 24575946-24576121,24576721-24576874,24576964-245770... 30 2.3
11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166 30 3.0
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 30 3.0
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 30 3.0
12_02_0818 - 23427625-23429022 29 4.0
05_01_0427 + 3374193-3374535,3374632-3374769,3375077-3375201,337... 29 4.0
03_04_0024 + 16556026-16556588,16556757-16556868 29 4.0
05_04_0186 + 18866762-18866949,18867207-18867345,18868068-188682... 29 5.3
11_07_0003 - 27182551-27183054 29 7.0
09_02_0278 + 6691685-6692188 29 7.0
05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,9... 29 7.0
04_04_1632 - 34926955-34927332 29 7.0
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 167 bits (406), Expect = 1e-41
Identities = 90/199 (45%), Positives = 117/199 (58%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
IP GLGTW+++PG V AV A+ GYRHIDCA Y NEKE+G A+ EG+V RED
Sbjct: 13 IPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALKKVFDEGIVKRED 72
Query: 335 LFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQ 514
+FITSKLW T H P+ V AL TL +L Y+DLYLIHWP K+ G+ F G+
Sbjct: 73 IFITSKLWCTNHAPEDVPVALDSTLQDLQTDYVDLYLIHWPVRMKK-GAGF----GGQNV 127
Query: 515 FXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLNQ 694
+ +RA +SK+LE LL A V P V+QVECHP Q
Sbjct: 128 LPTDIPATWAAMEKLHDSGK--ARAIGVSNFSSKKLEDLLAVARVPPAVDQVECHPVWQQ 185
Query: 695 KRLKEFCEARGVKITAYSP 751
+L++FC ++G+ ++AYSP
Sbjct: 186 TKLRKFCTSKGIHLSAYSP 204
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 167 bits (406), Expect = 1e-41
Identities = 93/206 (45%), Positives = 115/206 (55%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
IP GLGTW+S PG V AV A+ GYRHIDCA +Y NE EVG A+ +EGVV RED
Sbjct: 13 IPSVGLGTWQSDPGVVGDAVYAAVKAGYRHIDCARMYKNENEVGIALKKLFEEGVVKRED 72
Query: 335 LFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQ 514
LFITSKLW H P+ V +L +TL +L ++YLDLYLIHWP K+ + T+
Sbjct: 73 LFITSKLWCDCHAPEDVPESLDKTLSDLQLEYLDLYLIHWPFRVKKGSGISNTED----- 127
Query: 515 FXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLNQ 694
SRA +SK+L LL A V P V+QVECHP Q
Sbjct: 128 -YIPPDIPSTWGAMEKLYDSGKSRAIGVSNFSSKKLGDLLAVACVPPAVDQVECHPGWQQ 186
Query: 695 KRLKEFCEARGVKITAYSPPRLAGQT 772
+L FC++ GV ++AYSP G T
Sbjct: 187 TKLHNFCQSTGVHLSAYSPLGSPGST 212
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 143 bits (346), Expect = 2e-34
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 4/203 (1%)
Frame = +2
Query: 155 IPVFGLGTWKSKP-GEVT--QAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVT 325
+P GLGT + GE + A+ A+++GYRHID A VYG+E+ VGEA+ + GV+
Sbjct: 28 VPAVGLGTASLRSVGEESFRGALLAALEVGYRHIDTASVYGSERVVGEAVAGAARRGVIA 87
Query: 326 -REDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQS 502
RE++F+T+K+W T PDLV +L+E+L NL ++Y+D+YL+HWP + K +P +
Sbjct: 88 CREEVFVTTKVWCTQCHPDLVLPSLRESLQNLQMEYVDMYLVHWPMSVKPTKPHYPMKRE 147
Query: 503 GKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHP 682
+ ++ ++ +K+L+ LL A + P VNQVE +P
Sbjct: 148 DIMPMDLRGVWQAMEECHQLGLAKMIGVSN----FTTKKLQELLAFAKIPPAVNQVELNP 203
Query: 683 YLNQKRLKEFCEARGVKITAYSP 751
QK+L EFC+A+G+ +TAY P
Sbjct: 204 VWQQKKLMEFCKAKGIHVTAYFP 226
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 142 bits (343), Expect = 5e-34
Identities = 84/200 (42%), Positives = 109/200 (54%), Gaps = 1/200 (0%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEV-GEAITSKIKEGVVTRE 331
IP GLGT+K+ G V V A+ GYRHIDCA +Y NE+EV G A+ +GVV RE
Sbjct: 13 IPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEVIGGALKKLFDDGVVKRE 72
Query: 332 DLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 511
DLFITSK+W + P+ V A+ TL +L + Y+DLYLIHWP K+ L P +
Sbjct: 73 DLFITSKIWCSDLAPEDVPLAMDSTLKDLQLDYVDLYLIHWPFQIKKGTELSPEN----- 127
Query: 512 QFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLN 691
F +RA +SK+L LL A V P V+QVECHP
Sbjct: 128 -FVKPDIPSTWRAMEQLYDSGK-ARAIGVSNFSSKKLGDLLCVARVPPAVDQVECHPGWQ 185
Query: 692 QKRLKEFCEARGVKITAYSP 751
Q +L+ FC GV ++AY+P
Sbjct: 186 QAKLRAFCHTSGVHLSAYAP 205
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 532 TWTPGKAMEPLVKEGLVKSIGVSNFKLEAAGEV 630
TW +AME L G ++IGVSNF + G++
Sbjct: 136 TW---RAMEQLYDSGKARAIGVSNFSSKKLGDL 165
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 139 bits (336), Expect = 3e-33
Identities = 76/211 (36%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Frame = +2
Query: 155 IPVFGLGT--WKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVV-T 325
+P G+G + S P AV A++ G+RH D A +Y E +GEAI + G++ +
Sbjct: 18 MPAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAIAEATRRGLLAS 77
Query: 326 REDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSG 505
RE+ F+T+KLW T PDLV +L+E+L NL ++Y+DLYLIH P + K +FP +
Sbjct: 78 REEAFVTTKLWCTQCHPDLVLPSLRESLRNLQMEYVDLYLIHLPISVKPGPMVFPVKKED 137
Query: 506 KIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPY 685
+ F ++A +K +++LL AT+ P VNQVE +P
Sbjct: 138 VVPFDFGGVWRAMEECHRLGL----AKAIGVSNFTTKHIDKLLAVATILPAVNQVEMNPT 193
Query: 686 LNQKRLKEFCEARGVKITAYSPPRLAGQTLG 778
Q+ ++E+C+A+G+++TAYSP L GQ G
Sbjct: 194 WQQRTVREYCDAKGIRVTAYSP--LGGQNWG 222
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 138 bits (335), Expect = 4e-33
Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 4/209 (1%)
Frame = +2
Query: 155 IPVFGLGTWKS---KPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVV- 322
+P G+GT S P A A+++G+RH D A +YG E +GEAI + G+V
Sbjct: 17 MPAVGVGTADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAPLGEAIAEATRRGLVA 76
Query: 323 TREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQS 502
+RE++F+T+KLW T P LV +L+E+L NL ++Y+DLYL+HWP + K + P +
Sbjct: 77 SREEVFVTTKLWCTQCHPGLVLPSLRESLRNLQMEYVDLYLVHWPISVKPGPPMLPVKRE 136
Query: 503 GKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHP 682
+ F ++A +K L++LL AT+ P VNQVE +P
Sbjct: 137 DAVPFDFEGVWRAMEECHRLGL----AKAIGVSNFTTKHLDKLLAVATIPPAVNQVEMNP 192
Query: 683 YLNQKRLKEFCEARGVKITAYSPPRLAGQ 769
Q+ ++E+C A+G+++ AYSP L GQ
Sbjct: 193 VWQQRTVREYCAAKGIRVAAYSP--LGGQ 219
Score = 32.7 bits (71), Expect = 0.43
Identities = 32/110 (29%), Positives = 47/110 (42%)
Frame = +1
Query: 547 KAMEPLVKEGLVKSIGVSNFKLEAAGEVAAARDCQAGRQSGGMSSLPQPETPQGVL*GSR 726
+AME + GL K+IGVSNF + ++ A M+ + Q T + ++
Sbjct: 148 RAMEECHRLGLAKAIGVSNFTTKHLDKLLAVATIPPAVNQVEMNPVWQQRTVREYC-AAK 206
Query: 727 REDHGVLSPSARRTDPGAKPDDPQLMEDPKLKAIADRLGKTVAXXPHQIP 876
SP + G D +ME P L IA GK++A QIP
Sbjct: 207 GIRVAAYSPLGGQNWIGEGND---VMESPVLADIARARGKSIAQGRIQIP 253
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 133 bits (321), Expect = 2e-31
Identities = 85/212 (40%), Positives = 108/212 (50%), Gaps = 6/212 (2%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
IP GLGTW+S PG V AV A+ GYRHIDCA Y NEKEVG A+ K+ E V
Sbjct: 13 IPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLAL-KKLFEEVELEFQ 71
Query: 335 LFITSKL------WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTD 496
+ + L H P+ V AL TL++L ++YLDLYLIHWP K+ S+
Sbjct: 72 CLLGALLQLIRGDGCDHHAPEDVPEALDATLNDLQLEYLDLYLIHWPFRTKKGSSI---- 127
Query: 497 QSGKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVEC 676
GK + SRA +SK+L LL A V P V+QVEC
Sbjct: 128 --GKPESYLPPDIPSTWAAMEKLYDSGKSRAIGVSNFSSKKLGDLLAAARVPPAVDQVEC 185
Query: 677 HPYLNQKRLKEFCEARGVKITAYSPPRLAGQT 772
HP Q +L FC++ G+ ++AYSP G T
Sbjct: 186 HPGWQQMKLHNFCQSTGIHLSAYSPLGSPGST 217
Score = 33.1 bits (72), Expect = 0.32
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 532 TWTPGKAMEPLVKEGLVKSIGVSNFKLEAAGEVAAARDCQAGRQSGGMSSLPQPETPQGV 711
TW AME L G ++IGVSNF + G++ AA R + + Q +
Sbjct: 141 TWA---AMEKLYDSGKSRAIGVSNFSSKKLGDLLAA-----ARVPPAVDQVECHPGWQQM 192
Query: 712 L*GSRREDHGV-LSPSARRTDPGAKPDDPQLMEDPKLKAIADRLGKTVA 855
+ + G+ LS + PG+ + ++++P + +IA++LGKT A
Sbjct: 193 KLHNFCQSTGIHLSAYSPLGSPGSTFMNGNVLKEPIIISIAEKLGKTPA 241
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 130 bits (315), Expect = 1e-30
Identities = 78/216 (36%), Positives = 110/216 (50%), Gaps = 8/216 (3%)
Frame = +2
Query: 155 IPVFGLGTWK------SKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEG 316
+P+ G+GT P V AV AID GYRH D A YG E +GEA+ ++ G
Sbjct: 27 MPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGTEAPLGEAVLEAVRAG 86
Query: 317 VV-TREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYK-EDGSLFP 490
+V +R+DL+ITSKLW + P V AL+ TL NL + Y+DLYLIHWP + E + P
Sbjct: 87 MVASRDDLYITSKLWISDTHPGRVLPALRRTLRNLQMVYIDLYLIHWPIRLRVEQETPSP 146
Query: 491 TDQSGKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQV 670
+ + ++A K+L LL AT+ P NQV
Sbjct: 147 VYDNDFVMMDMEGVWKDMEECQRLGL----TKAIGVSNFTCKKLNTLLSFATIPPAANQV 202
Query: 671 ECHPYLNQKRLKEFCEARGVKITAYSPPRLAGQTLG 778
E +PY Q +L+EFC+ + +++ AYSP +G G
Sbjct: 203 EINPYCRQNKLREFCKEKEIQLCAYSPLGASGTIWG 238
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 130 bits (315), Expect = 1e-30
Identities = 77/211 (36%), Positives = 110/211 (52%), Gaps = 3/211 (1%)
Frame = +2
Query: 155 IPVFGLGTWKS--KPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVV-T 325
+P G+GT +P + +AV AI+ GYRH D A Y E +GEA ++ G + +
Sbjct: 15 MPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEAAAEAVRSGAIAS 74
Query: 326 REDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSG 505
R DLFITSKLW + D V AL++TL NL ++Y+DLYL+HWP + K P
Sbjct: 75 RADLFITSKLWCSDAHRDRVLPALRQTLWNLQMEYVDLYLVHWPVSMKPGRYKAPFTADD 134
Query: 506 KIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPY 685
+ F ++A + K+L+ LL AT+ P VNQVE +P
Sbjct: 135 FVPFDMRAVWEAMEECHRLGL----AKAIGVCNFSCKKLDTLLSFATIPPAVNQVEVNPV 190
Query: 686 LNQKRLKEFCEARGVKITAYSPPRLAGQTLG 778
Q++L+E C +GV+I AYSP +G G
Sbjct: 191 WQQRKLRELCREKGVQICAYSPLGASGTHWG 221
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 130 bits (315), Expect = 1e-30
Identities = 79/220 (35%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Frame = +2
Query: 149 HLIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTR 328
H +P GLG W+ + + A+ IGYRH DCA Y NE EVG+A+ + G+V R
Sbjct: 19 HTMPSVGLGVWRMDSPAIRDLIHSALRIGYRHFDCAADYQNEAEVGDALAEAFQTGLVKR 78
Query: 329 EDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDG---SLFPTDQ 499
EDLFIT+KLWN+ H V A +++L L + YLDLYLIH+P A + G +
Sbjct: 79 EDLFITTKLWNSDH--GHVVEACKDSLKKLRLDYLDLYLIHFPVATRHTGVGTTASALGD 136
Query: 500 SGKIQF-----XXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQ---LER-LLQHATVK 652
G + + + R S+ SN L R L +A +K
Sbjct: 137 DGVLDIDTTISLETTWHAMEDLVSMGLVRSIGIRGSQLLESNHNYDIFLTRDCLAYAKIK 196
Query: 653 PVVNQVECHPYLNQKRLKEFCEARGVKITAYSPPRLAGQT 772
P VNQ+E HPY + L +FC+ G+ +TA++P L G T
Sbjct: 197 PAVNQIETHPYFQRDCLVKFCQKHGILVTAHTP--LGGST 234
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 538 TPGKAMEPLVKEGLVKSIGVSNFKLEAAG---EVAAARDCQA 654
T AME LV GLV+SIG+ +L + ++ RDC A
Sbjct: 150 TTWHAMEDLVSMGLVRSIGIRGSQLLESNHNYDIFLTRDCLA 191
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 119 bits (287), Expect = 3e-27
Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Frame = +2
Query: 155 IPVFGLGTWK---SKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVV- 322
+P G+GT + E T A+ AI++GYRH D A +Y E V EA+ ++ G+V
Sbjct: 18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVA 77
Query: 323 TREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQS 502
+R D+F+TSKLW + V A +ETL NL + Y+DL L+HWP FP
Sbjct: 78 SRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATVAPGSYDFPFP-- 135
Query: 503 GKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHP 682
K + + +RA ++K+LE+LL A V+P NQVE +P
Sbjct: 136 -KEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNP 194
Query: 683 YLNQKRLKEFCEARGVKITAYSPPRLAGQTLG 778
Q+ L+E C GV++ YSP G G
Sbjct: 195 MWQQRTLREVCRREGVQLCGYSPLGAKGTPWG 226
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 119 bits (287), Expect = 3e-27
Identities = 73/218 (33%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Frame = +2
Query: 137 STMEHLIPVFGLGTWK---SKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKI 307
S + +P G+GT + + T A+ AI++GYRH D A +Y E VGEA+ +
Sbjct: 10 SELIQTMPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAV 69
Query: 308 KEGVV-TREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSL 484
+ G++ +R D+F+TSK+W + V A +ETL NL + Y+DL L+HWP +
Sbjct: 70 RRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTPGNYD 129
Query: 485 FPTDQSGKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVN 664
FP K + +RA ++K+LE+LL A V+P VN
Sbjct: 130 FPFP---KEVILPSFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVN 186
Query: 665 QVECHPYLNQKRLKEFCEARGVKITAYSPPRLAGQTLG 778
QVE +P Q+ L+E C GV++ YSP G G
Sbjct: 187 QVEVNPMWQQRTLREVCRREGVQLCGYSPLGAKGTPWG 224
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 117 bits (281), Expect = 2e-26
Identities = 75/207 (36%), Positives = 108/207 (52%), Gaps = 6/207 (2%)
Frame = +2
Query: 149 HLIPVFGLGTWKSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVV- 322
H +PV G GT S P ++ + A+ +GYRH+D A VYG E VG A+ ++ G V
Sbjct: 29 HAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAVGAAVAEAVRCGAVA 88
Query: 323 TREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAY-KED--GSLFPT 493
+R +LF+T+KL P V AL+E+L L + Y+DL+LIHWP A K+D G L
Sbjct: 89 SRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVAIGKKDAAGELTWD 148
Query: 494 DQS-GKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQV 670
D S G + F +R+ ++ ++ RLL A V P VNQV
Sbjct: 149 DLSRGLVPFDMEGVWRGMEECHRLGL----ARSIGVSNFSAAKMSRLLALAAVPPAVNQV 204
Query: 671 ECHPYLNQKRLKEFCEARGVKITAYSP 751
E + Q++++E C GV + AYSP
Sbjct: 205 EMNVGWRQEKVREVCGEGGVVVAAYSP 231
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 111 bits (268), Expect = 6e-25
Identities = 70/209 (33%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Frame = +2
Query: 164 FGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVV-TREDLF 340
F LG + P V V AI+ GYRH D A VY E +G+A+ ++ G+V +R++L+
Sbjct: 22 FPLGA--TDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILGDAVAEAVRAGLVASRDELY 79
Query: 341 ITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYK--EDGSLFPTDQSGKIQ 514
ITSKLW P V +L+ L + ++YLDLYLIH+P + + ED + +
Sbjct: 80 ITSKLWVAHAHPGHVLPSLRRALRKMQMEYLDLYLIHFPVSMRLAEDPESMTYSKDDLVM 139
Query: 515 FXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQ--------- 667
++A + K+LE LL AT+ P NQ
Sbjct: 140 MDMEGVWKEMEECQRLGL----TKAIGVSNFSCKKLETLLSFATISPAANQLKVRLFQIV 195
Query: 668 -VECHPYLNQKRLKEFCEARGVKITAYSP 751
VE HPY Q +L+EFC+ +G+++ AYSP
Sbjct: 196 EVEVHPYCRQNKLREFCKEKGIQLCAYSP 224
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 111 bits (268), Expect = 6e-25
Identities = 64/176 (36%), Positives = 95/176 (53%)
Frame = +2
Query: 224 IDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQE 403
+ GYRH+D A YG E+EVG+ + + ++ G+ R+DLF+TSK+W T P+ VR AL+
Sbjct: 89 LQAGYRHVDTAAQYGIEQEVGKGLKAAMEAGI-NRKDLFVTSKIWCTNLAPERVRPALKN 147
Query: 404 TLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFXXXXXXXXXXXXXXXXXKRVWS 583
TL +L + Y+DLYLIHWP K DG+ P + ++F +
Sbjct: 148 TLKDLQLDYIDLYLIHWPFRLK-DGAHQPPEAGEVLEFDMEAVWREMERLVTDGLVKDIG 206
Query: 584 RASESPTSNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSP 751
+ S T +L RLLQ A + P +E HP ++ E C+ G+ +TAYSP
Sbjct: 207 VCNFSVT----KLNRLLQSANIPPA---MEMHPGWKNNKIFEACKKHGIHVTAYSP 255
>05_05_0084 -
22262007-22262300,22262435-22262707,22263418-22263468,
22263944-22264035,22264715-22264724
Length = 239
Score = 58.0 bits (134), Expect = 1e-08
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +2
Query: 581 SRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSP 751
+RA + K+LE LL A V P VNQVECHP Q +L++ C+++GV ++AY+P
Sbjct: 90 ARAIGVSNFSCKKLEDLLNVARVPPAVNQVECHPVWQQGKLRKLCQSKGVHLSAYAP 146
Score = 37.1 bits (82), Expect = 0.020
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 230 IGYRHIDCAYVYGNEKEVGEAITSK 304
+GYRHIDC+ YGN+KEV + +K
Sbjct: 35 VGYRHIDCSPQYGNQKEVHGPVRAK 59
Score = 29.9 bits (64), Expect = 3.0
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = +1
Query: 532 TWTPGKAMEPLVKEGLVKSIGVSNFKLEAAGEVAAARDCQAGRQSGGMSSLP-QPETPQG 708
TW +AME L G ++IGVSNF + ++ R ++ + P QG
Sbjct: 77 TW---QAMEKLYDSGKARAIGVSNFSCKKLEDL-----LNVARVPPAVNQVECHPVWQQG 128
Query: 709 VL*GSRREDHGV-LSPSARRTDPGAKPDD-PQLMEDPKLKAIADRLGKTVA 855
L + GV LS A PG+ +D P ++ P + +IA +L K+ A
Sbjct: 129 KL-RKLCQSKGVHLSAYAPLGSPGSPGNDGPNVLSHPTVISIAKKLQKSPA 178
>07_01_0316 +
2226010-2226256,2226956-2227047,2227143-2227180,
2227289-2227450,2227540-2227562,2227673-2227744,
2227858-2228025,2228318-2228400,2228533-2228595,
2228735-2228917
Length = 376
Score = 35.1 bits (77), Expect = 0.081
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Frame = +2
Query: 197 EVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE------DLFITSKL- 355
E A +ID G D A VYG +G + + G + D+ + +K
Sbjct: 88 EAKAAFDTSIDNGMTLFDTAEVYGTAL-MGAVNSESLLGGFIKERQEKEQIDVAVATKFA 146
Query: 356 ---WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSL 484
W F R ++ AL+++LD L + ++LY +HWP + +G L
Sbjct: 147 ALPWR-FGRGSVL-SALKKSLDRLGLSSVELYQLHWPGLWGNEGYL 190
>08_02_0037 + 11480213-11481013,11483612-11483707
Length = 298
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -3
Query: 458 GASVSGTDPSTERSDCPGSPAGHRAPSPGDETCSTVSK 345
GAS SG + S +R PG+ A S GDE CS+ K
Sbjct: 211 GASSSGDESSRKRKAAPGAGGSGGASSSGDEGCSSPEK 248
>10_08_0021 +
14217455-14217505,14217742-14217909,14219137-14219340,
14219429-14219601,14219970-14220066,14220183-14220336,
14222029-14222209,14222858-14222898,14223146-14223231,
14223282-14223389,14223538-14223579
Length = 434
Score = 33.1 bits (72), Expect = 0.32
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +2
Query: 212 VKDAIDIGYRHIDCAYVYG---NEKEVGEAITSKIKEGVVTREDLFITSKLWNTF---HR 373
V+ A + G D + YG NE +G+A+ +E V I N
Sbjct: 45 VRRAFEAGVTFFDTSDAYGPHTNEVLLGKALKQLPREKVQVATKFGIAGFDANGMLVKGT 104
Query: 374 PDLVRGALQETLDNLNVQYLDLYLIH 451
PD VR + +L+ L V Y+DLY H
Sbjct: 105 PDYVRACCEASLERLAVDYIDLYYQH 130
>03_02_0970 + 12805537-12806253
Length = 238
Score = 32.7 bits (71), Expect = 0.43
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 501 QVKSSSRXVDYVDTWXGYGAARQRGSGQEHRSLQLQTRSSWRGCCSTRLSSRS 659
Q+ S +R V W GY R G+G E R +WRG R RS
Sbjct: 111 QILSKARLGHLVGRWDGYRPCRGGGAGGEQRPWFKAASEAWRGGGGPRCEFRS 163
>03_05_0299 +
22887603-22887797,22887891-22887986,22888089-22888172,
22888573-22888733,22889458-22889575,22889914-22890049,
22890351-22890529,22890690-22890929
Length = 402
Score = 32.3 bits (70), Expect = 0.57
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 383 VRGALQETLDNLNVQYLDLYLIHWPQAY 466
++ +++++L L+ Y+DL IHWP Y
Sbjct: 156 IKESVEKSLSRLSTDYIDLLQIHWPDRY 183
>03_03_0275 + 16102248-16102263,16102393-16102811
Length = 144
Score = 32.3 bits (70), Expect = 0.57
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -3
Query: 521 PRTGFYLIGRSGRESRLPCRPGASVSGTDPSTERS 417
P T +L+GR G E P R +++S T PST R+
Sbjct: 68 PGTPEHLLGRGGEEEGQPARHASALSPTRPSTARA 102
>05_06_0098 + 25560158-25560925
Length = 255
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 470 PCRPGASVSGTDPSTERSDCPGSPAGHRAPSPGDETCS 357
P P +S S + PS+ + SP+ HR P P + S
Sbjct: 5 PNSPSSSTSSSSPSSAAAAASSSPSSHRPPPPPPSSSS 42
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -3
Query: 470 PCRPGASVSGTDPSTERSDCPGSPAGHRAPSPGDETCSTVSKL*TDLP 327
P P SVS DP+TE P +P HR P P + L +P
Sbjct: 27 PHVPSTSVSPPDPATE---APPAPKQHRGPRPAPRNPGSAKPLTAGVP 71
>04_01_0154 - 1775693-1775942,1776834-1777588
Length = 334
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 634 AARDCQAGRQSGGMSSLPQPETPQGVL*GSRREDHGVLSPSARRTDPGAKPDDP 795
AA + AGR+ GG ++P E P GV G+ V + +A D A DP
Sbjct: 12 AAGNRAAGREGGGGENVPAAEHPLGVGGGATHARRKVAAGAAGGADAVAPDADP 65
>01_05_0718 -
24575946-24576121,24576721-24576874,24576964-24577060,
24577142-24577314,24577426-24577629,24577725-24577892,
24577938-24578084
Length = 372
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +2
Query: 233 GYRHIDCAYVYG---NEKEVGEAITSKIKEGVVTREDLFI---TSKLWNTFHRPDLVRGA 394
G D + VYG NE +G+A+ +E V I + RP+ VR
Sbjct: 84 GVTFFDTSDVYGPLANEILLGKALKQLPREQVQVATKFGIRRGADGVRAVCGRPEYVRAC 143
Query: 395 LQETLDNLNVQYLDLYLIH 451
+ +L L V Y+DLY H
Sbjct: 144 CEASLGRLGVDYIDLYYQH 162
>11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166
Length = 940
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +2
Query: 179 WKSKPGEVTQAVKDAIDIGYRHID-CAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKL 355
WKS E + V++ DIG + C + K + + SK K ++ + + +
Sbjct: 337 WKSINIEDEKEVQNLRDIGIEIVQKCGGLPLAIKVIARVLASKDKAENEWKK--ILANYV 394
Query: 356 WNTFHRPDLVRGALQETLDNL--NVQYLDLYLIHWPQ 460
W+ + P +RGAL + D+L +++ LY I +P+
Sbjct: 395 WSMYKLPKEIRGALYLSYDDLPQHLKQCFLYCIVYPE 431
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 29.9 bits (64), Expect = 3.0
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 RKREGSRRSYNQQN*GRSRNEGRSVHNFETVEHVS-SPGLGARCPAGDPGQSERSVLGSV 441
R E SRR+ +N RSRN R N + ++ PG G P PGQ G V
Sbjct: 204 RANERSRRNDRPRNFDRSRNFERRRENMQNFQNRDVPPGQGFNSPP-PPGQ------GPV 256
Query: 442 PDTLAPGLQGRRLSLPDRP 498
P AP + + ++P P
Sbjct: 257 PPRDAPPMHHAQGNVPPPP 275
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 29.9 bits (64), Expect = 3.0
Identities = 26/87 (29%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
Frame = -3
Query: 596 TPMLLTRPSLTSGSIAXPGVHVIDVPR-----TGFYLIGRSGRESRLPCR-PGASVSGTD 435
+P T P+ G P V DVP T G G PC P + SGT
Sbjct: 364 SPSSGTSPTTPGGGYYPPTPSVGDVPPSPASGTSPSTPGSGGYSPSTPCSAPPSPSSGTS 423
Query: 434 PSTERSDCPGSPAGHRAPSPGDETCST 354
P+T S + PSP +T T
Sbjct: 424 PTTPGGGYSPSTPCNAPPSPSSDTSPT 450
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 461 PGASVSGTDPSTERSDCPGSPAGHRA-PSPGDETCST 354
P + SGT PST C SP A PSP +T T
Sbjct: 467 PPSPSSGTSPSTPGGGCSSSPTPCDAPPSPSSDTSPT 503
>12_02_0818 - 23427625-23429022
Length = 465
Score = 29.5 bits (63), Expect = 4.0
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = -1
Query: 880 DLVSDEXXGRQSSRVCQRWPSVWGPP*AGGRRAWPQGLSGEPRG---RVRRDLHAASLTE 710
DLV+DE R +R R+ SV G AW +SG+P R R+ H++S
Sbjct: 18 DLVADEILTRLPARSLARFASVCG--------AWRAAISGDPSSFLRRRRKKEHSSSFLL 69
Query: 709 LLEAFL--VEVRMTF 671
LL A + E R+ F
Sbjct: 70 LLYALVEDAERRLAF 84
>05_01_0427 +
3374193-3374535,3374632-3374769,3375077-3375201,
3375776-3376045,3376125-3376255,3377005-3377212,
3377301-3377366,3377456-3377533,3378426-3378482
Length = 471
Score = 29.5 bits (63), Expect = 4.0
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +1
Query: 316 SRNEGRSVHNFETVEHVSSPGLGA------RCPAGDPGQSERSVLGSVPDTLAPGLQGRR 477
+R+ + + ++ V SPG+ + R G+S +V+ + T PG RR
Sbjct: 30 TRSRAKQIGLVLPIQAVESPGISSNNNKKRRIEEETAGESRATVIPTTTTTGEPGTLARR 89
Query: 478 LSLPDRPIR*NPVLGTSITWTPGKAMEPLVKEGL 579
P +P P +G +W + ++ L K L
Sbjct: 90 PIHPPQPHSTAPRIGRESSWIAQRKVDRLRKATL 123
>03_04_0024 + 16556026-16556588,16556757-16556868
Length = 224
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 98 LIAPPPWELSGEREAKVCKG 39
+ PPPW S R+A+VC+G
Sbjct: 82 IFPPPPWRPSWLRQARVCRG 101
>05_04_0186 +
18866762-18866949,18867207-18867345,18868068-18868295,
18869023-18869081,18869411-18869482,18870239-18870287,
18870431-18870661,18872018-18872187,18872274-18872478,
18872826-18873494,18873592-18873819,18873901-18874689
Length = 1008
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 588 HRSLQLQTRSSWRGCCSTRLSSRSSIRWNVIL 683
H +LQL+ RSSW C ++ + + N+ L
Sbjct: 268 HCTLQLENRSSWLSDCKLKIQVSTELEGNICL 299
>11_07_0003 - 27182551-27183054
Length = 167
Score = 28.7 bits (61), Expect = 7.0
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -3
Query: 488 GRESRLPCRPGASVSGTDPSTERSDCPG---SPAGHRAPSPGDETCSTVS 348
G +R P + SG +P+T S PG SPA RA SPG T +T++
Sbjct: 55 GSSTRSPVGSASPSSGRNPATTGS--PGGVRSPATARAGSPGGGTGTTLA 102
>09_02_0278 + 6691685-6692188
Length = 167
Score = 28.7 bits (61), Expect = 7.0
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -3
Query: 488 GRESRLPCRPGASVSGTDPSTERSDCPG---SPAGHRAPSPGDETCSTVS 348
G +R P + SG +P+T S PG SPA RA SPG T +T++
Sbjct: 55 GSSTRSPVGSASPSSGRNPATTGS--PGGVRSPATARAGSPGGGTGTTLA 102
>05_01_0002 -
8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,
9802-9902,10016-10651,10820-10899,11014-11673,
11787-12041,12154-12281,12515-12669,12735-12919,
13020-13049,13164-13239,13371-13504,13703-13994,
14400-14567,14647-14745,14843-15014,15103-15281
Length = 1352
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 676 SSLPQPET-PQGVL*GSRREDHGVLSPSAR 762
S+ P+P T P+GV SR +D G L PSAR
Sbjct: 173 STAPEPVTVPRGV--SSRHDDRGPLMPSAR 200
>04_04_1632 - 34926955-34927332
Length = 125
Score = 28.7 bits (61), Expect = 7.0
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = -1
Query: 790 RRAWPQGLSGEPRGRVRRDLHAASLTELLEAFLVEVRMTFHLIDDRLD 647
RRAW L G+ R + D+ AA L FLV+V +T L DD D
Sbjct: 77 RRAWAATLEGKRRTVHKEDVAAAVQNTDLFDFLVDV-VTADLGDDHTD 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,074,795
Number of Sequences: 37544
Number of extensions: 593336
Number of successful extensions: 2122
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2094
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -