Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B06
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 194 1e-49
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 194 1e-49
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 137 1e-32
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 126 2e-29
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 124 7e-29
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 118 8e-27
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 104 1e-22
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 96 4e-20
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 94 1e-19
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 78 1e-14
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 75 1e-13
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 73 4e-13
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 29 3.6
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 29 6.3
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 29 6.3
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 8.3
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 8.3
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 8.3
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 8.3
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 8.3
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 194 bits (472), Expect = 1e-49
Identities = 98/255 (38%), Positives = 134/255 (52%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
IP GLGTW+SKPGEV A+K A+ GYRHIDCA+VY N+KEVGEA+ + EG V RE+
Sbjct: 13 IPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREE 72
Query: 335 LFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQ 514
LFITSK+WNTFH + L +L + Y+DL LIHWPQ Y E LFP ++GK++
Sbjct: 73 LFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGENGKMR 132
Query: 515 FXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLNQ 694
+ K R+ Q++R+ A VKP QVE HPY Q
Sbjct: 133 Y-SDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQ 191
Query: 695 KRLKEFCEARGVKITAYSPPRLAGQTLGXXXXXXXXXXXXXXXXXLTDSGRLSPXXLIRY 874
+L+EFC+ +G+ + YSP G G+ ++R+
Sbjct: 192 VKLREFCKEKGIVVVGYSPLGNPGSAFFRKDGDPNVLTNEVVAGIAKAHGKTPAQIILRW 251
Query: 875 QIDXGXNRDPESPSP 919
+D G + P+S +P
Sbjct: 252 FVDSGLSAIPKSVTP 266
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 194 bits (472), Expect = 1e-49
Identities = 98/255 (38%), Positives = 134/255 (52%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
IP GLGTW+SKPGEV A+K A+ GYRHIDCA+VY N+KEVGEA+ + EG V RE+
Sbjct: 13 IPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREE 72
Query: 335 LFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQ 514
LFITSK+WNTFH + L +L + Y+DL LIHWPQ Y E LFP ++GK++
Sbjct: 73 LFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGENGKMR 132
Query: 515 FXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLNQ 694
+ K R+ Q++R+ A VKP QVE HPY Q
Sbjct: 133 Y-SDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQ 191
Query: 695 KRLKEFCEARGVKITAYSPPRLAGQTLGXXXXXXXXXXXXXXXXXLTDSGRLSPXXLIRY 874
+L+EFC+ +G+ + YSP G G+ ++R+
Sbjct: 192 VKLREFCKEKGIVVVGYSPLGNPGSAFFRKDGDPNVLTNEVVAGIAKAHGKTPAQIILRW 251
Query: 875 QIDXGXNRDPESPSP 919
+D G + P+S +P
Sbjct: 252 FVDSGLSAIPKSVTP 266
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 137 bits (331), Expect = 1e-32
Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
Frame = +2
Query: 155 IPVFGLGTWKSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 331
+P+FGLGTW+ K E+T A++ A+D GYR ID A++Y NE +G+ + I G + RE
Sbjct: 14 LPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSGKLKRE 73
Query: 332 DLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYK-EDGSLFPTDQSGK 508
D+F+TSKL T H P+ V ++ L L ++Y+DLYLIH P +K ++GS P ++G+
Sbjct: 74 DIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFAPLMENGE 133
Query: 509 IQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYL 688
+ K +A + QL+ L A VKP QVECH Y
Sbjct: 134 LA-VTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPANQQVECHIYW 192
Query: 689 NQKRLKEFCEARGVKITAYSP 751
Q+ L+ C+ GV +TAY+P
Sbjct: 193 PQQELRALCKKLGVTVTAYAP 213
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 126 bits (304), Expect = 2e-29
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
+PV G GTW+ + V+DA++ GYRHID A + N++EV I K V RE+
Sbjct: 15 MPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCKIRKVRREE 74
Query: 335 LFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKED-----GSLFPTDQ 499
LF++SK+WNT+H + + E L+ Y+DL +IHWP + ED L+P
Sbjct: 75 LFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDEPPGERGLWPRGA 134
Query: 500 SGKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECH 679
+GK+++ + R+ N Q+E++ +KP V QVE +
Sbjct: 135 NGKMRY-SDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIKPAVLQVEMN 193
Query: 680 PYLNQKRLKEFCEARGVKITAY 745
P+L+Q+ +++FC +G+ +TA+
Sbjct: 194 PFLDQEEIRQFCREKGIILTAF 215
Score = 29.5 bits (63), Expect = 3.6
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +1
Query: 532 TWTPGKAMEPLVKEGLVKSIGVSNFKLEAAGEVAAARDCQAGRQSGGMSS-LPQPETPQG 708
TW KA+E + G ++SIG++NF + +V + M+ L Q E Q
Sbjct: 148 TW---KALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIKPAVLQVEMNPFLDQEEIRQF 204
Query: 709 VL*GSRREDHGVLSPSARRTDPGA----KPDDPQLMEDPKLKAIADRLGKTV 852
RE +L+ +PG+ K +DP L+ + L++IA GK+V
Sbjct: 205 C-----REKGIILTAFMLTGNPGSALYRKHEDPNLLYNETLQSIAKGHGKSV 251
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 124 bits (300), Expect = 7e-29
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 1/199 (0%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
+PV GLGTW+S P EV AVK A+ GYR ID A VY NE+ +G AI ++EGVV RE+
Sbjct: 16 MPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREE 75
Query: 335 LFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQ 514
LFIT+K W P + G L+E+L L ++Y+DLYL H P A+ +D S +
Sbjct: 76 LFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDV- 134
Query: 515 FXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVN-QVECHPYLN 691
K ++A N+ Q+ R L + PV N QVE H Y
Sbjct: 135 ----------WRQFDAVYKAGLAKAVGVSNWNNDQISRALA-LGLTPVHNSQVELHLYFP 183
Query: 692 QKRLKEFCEARGVKITAYS 748
Q +FC+ + +T+Y+
Sbjct: 184 QHDHVDFCKKHNISVTSYA 202
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 118 bits (283), Expect = 8e-27
Identities = 69/199 (34%), Positives = 106/199 (53%)
Frame = +2
Query: 152 LIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 331
L+P GLGTW+ E +++A+ GYRHID A +Y NE ++G+A+ EG++ RE
Sbjct: 15 LMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALAELFAEGILKRE 74
Query: 332 DLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 511
D+FIT+K + PD+V AL+ +L L + Y+DLYL H P + K+DGS F +D K+
Sbjct: 75 DIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKDDGS-FRSDV--KV 131
Query: 512 QFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLN 691
+ ++A N Q+ R++ V +Q+E H YL
Sbjct: 132 EDIWRGFEKVYGLGL--------TKAIGVSNFNESQIVRIMNIQKVPIHASQLELHLYLP 183
Query: 692 QKRLKEFCEARGVKITAYS 748
QK +E C+ + ITAY+
Sbjct: 184 QKAHRELCKKHNILITAYA 202
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 104 bits (249), Expect = 1e-22
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Frame = +2
Query: 134 RSTMEHLIPVFGLGTWKSKPGEVTQAVKDA-IDIGYRHIDCAYVYGNEKEVGEAITSKIK 310
R +++ +P+ G+GTW+ + E+ + V DA GYR ID A VY NE ++G + +
Sbjct: 4 REYVKNNMPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLP 63
Query: 311 EGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 490
+ RED++ITSKL + R +++E+L NL V+YLDL LIHWP GS
Sbjct: 64 ANGLKREDIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWP------GSSLK 117
Query: 491 TDQSGKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQV 670
++ + + V E LE L + + V P VNQV
Sbjct: 118 SENPANKKLRVESWNVMCEMMAEGKLRSVGVSNFE-----ICHLEELKKDSNVVPAVNQV 172
Query: 671 ECHPYLNQKRLKEFCEARGVKITAYS 748
E HP+ +Q L ++C + AYS
Sbjct: 173 EYHPHFHQDDLVKYCNENNIHFQAYS 198
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 95.9 bits (228), Expect = 4e-20
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 2/209 (0%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
IP LGT+++K ++ AV +A+ +GYR D A Y NEK++G A+ + + + ED
Sbjct: 10 IPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNICSED 69
Query: 335 LFITSKL--WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGK 508
+++TSK+ +++ + +L+R + E+L+ L+ +YLDL L+H+P+ L D +
Sbjct: 70 IYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPR------PLDTEDLNEN 123
Query: 509 IQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYL 688
+ R ++ P +E + + T++P VNQ+E HP+
Sbjct: 124 NKMYRKDTWIALEKLHAEGKIRSIGVSNYEP----HHIEEMRSYITIEPQVNQIEYHPHF 179
Query: 689 NQKRLKEFCEARGVKITAYSPPRLAGQTL 775
+K L+ +C + A+SP +TL
Sbjct: 180 QRKVLRAYCNKNEILFQAFSPLGRGNKTL 208
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 93.9 bits (223), Expect = 1e-19
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 3/201 (1%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
IP G GT+K V A+ A+ GYR D A Y NEKE+GEA+ + + ++R D
Sbjct: 21 IPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHGLSRSD 80
Query: 335 LFITSKLW-NTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 511
+F+TSK + + + + RG ++E+L +L Y+D+YL+H+P+ D + KI
Sbjct: 81 VFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKPNDSDNDDVNNAEYRKI 140
Query: 512 QFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSK--QLERLLQHATVKPVVNQVECHPY 685
+ + + SN + LE L +A V P NQ+E HP+
Sbjct: 141 AY------------EVLEEAKAAGKVRSIGVSNYEIVHLEELKTYAKVPPCANQLEYHPH 188
Query: 686 LNQKRLKEFCEARGVKITAYS 748
+ L+++C+ + + A+S
Sbjct: 189 FARIPLQKYCKEKNIFFQAFS 209
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 93.5 bits (222), Expect = 2e-19
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Frame = +2
Query: 158 PVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 337
P+ GLGT+K +V + A+ GYR D A VY NEKE+G+A+ + + + RED+
Sbjct: 12 PLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHNLKREDI 71
Query: 338 FITSKLW-NTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQ 514
FIT+K+ NT V+ + E+L L Y+D+YLIH+P+++ + G P +++ +I
Sbjct: 72 FITTKMHPNTVEN---VKKLVDESLSLLKTSYIDMYLIHYPKSF-DYGDQDPMNKTLRIA 127
Query: 515 FXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQ-HATVKPVVNQVECHPYLN 691
R+ + + LE L P NQVE HP+
Sbjct: 128 TWNDLWECKNAGKI---------RSVGVSSFEIRHLEELKDLGKNFPPCCNQVEYHPHFT 178
Query: 692 QKRLKEFCEARGVKITAYSPPRLAGQTL 775
++ LK +C++ G+ A+S +TL
Sbjct: 179 REELKNYCKSEGIFFQAFSSLARHNETL 206
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 77.8 bits (183), Expect = 1e-14
Identities = 41/79 (51%), Positives = 49/79 (62%)
Frame = +2
Query: 149 HLIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTR 328
H +P GLGTW+S +V AVK A+ GY ID A Y NE+ +G AI I EGVV R
Sbjct: 54 HSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKR 113
Query: 329 EDLFITSKLWNTFHRPDLV 385
EDLFIT+K+ N F LV
Sbjct: 114 EDLFITTKVPNLFSSLRLV 132
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 74.5 bits (175), Expect = 1e-13
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGE-VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 331
+P GLG + + + + +++ A+ GYR D A +Y NE +G ++ + + +TRE
Sbjct: 20 MPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQFGLTRE 79
Query: 332 DLFITSKLWN-TFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGK 508
D+FIT+K+ + + L +L L Y+DL LIH+P+ ++ G+ D +
Sbjct: 80 DVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRD-RDTGN----DDDYE 134
Query: 509 IQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSK--QLERLLQHATVKPVVNQVECHP 682
I + R SN + L + ++A ++PV+NQ E P
Sbjct: 135 IN-----KSRRKIVWQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYEYQP 189
Query: 683 YLNQKRLKEFCEARGVKITAYS 748
YL + LK+FC+ + + +YS
Sbjct: 190 YLTRPTLKKFCDLNNIVVQSYS 211
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 72.5 bits (170), Expect = 4e-13
Identities = 63/200 (31%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAID-IGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 331
+P+ GLGT S G AV +I GYR ID A YG EK++G A+ K V RE
Sbjct: 13 MPLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAV----KNCSVPRE 67
Query: 332 DLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 511
++F+++KLW D V A Q + + L YLD+Y+IH PQ + T +
Sbjct: 68 EMFLSTKLWPV-DCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQLPDWIVNQKETKEKTWR 126
Query: 512 QFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLN 691
Q S S + +L HA NQVE HP+ +
Sbjct: 127 QMELLYEDEHVRSIGV-------SNYSIEDLDELLEFASILPHA------NQVELHPWFH 173
Query: 692 QKRLKEFCEARGVKITAYSP 751
Q LK +C+ G+ Y P
Sbjct: 174 QADLKNYCDELGILTMGYCP 193
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 356 WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGS 481
W P + GAL+++L L+++Y+DLYL H P A+ +D S
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDDMS 94
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 391 CPAGDPGQSERSVLGSVPDTLAPGLQGRR 477
CPAG+PG E GS + PGL+GRR
Sbjct: 150 CPAGEPG--EPGPRGSPGNNGLPGLKGRR 176
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 458 GASVSGTDPSTERSDCPGSPAGHRAPSP 375
GAS G+ P+ E++ P PA PSP
Sbjct: 169 GASSGGSAPAAEKAPEPAKPAASSQPSP 196
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +1
Query: 613 EAAGEVAAARDCQAGRQSGGMSSLPQPETPQGVL*GSRREDHGVLSPSARRTDPGAKPDD 792
E+ G AA+ +A + SSLP + V+ ++E + P + P D+
Sbjct: 332 ESGGSRAASPAPRAQSPATPSSSLPTDIENKAVISSPKKEPEEIEVPPLPPSAPDVVKDE 391
Query: 793 PQLMEDPKLKAIADRLGKTVAXXP 864
P +E+ + I + K VA P
Sbjct: 392 PMEIEEEEEYTIPEEKPKPVAIVP 415
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 400 GDPGQSERSVLGSVPDTLAPGLQGR 474
G PGQ +S+ G V APGLQG+
Sbjct: 1261 GMPGQPGQSIAGPVGPPGAPGLQGK 1285
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 400 GDPGQSERSVLGSVPDTLAPGLQGR 474
G PGQ +S+ G V APGLQG+
Sbjct: 1260 GMPGQPGQSIAGPVGPPGAPGLQGK 1284
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 400 GDPGQSERSVLGSVPDTLAPGLQGR 474
G PGQ +S+ G V APGLQG+
Sbjct: 1260 GMPGQPGQSIAGPVGPPGAPGLQGK 1284
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 400 GDPGQSERSVLGSVPDTLAPGLQGR 474
G PGQ +S+ G V APGLQG+
Sbjct: 1261 GMPGQPGQSIAGPVGPPGAPGLQGK 1285
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 400 GDPGQSERSVLGSVPDTLAPGLQGR 474
G PGQ +S+ G V APGLQG+
Sbjct: 1297 GMPGQPGQSIAGPVGPPGAPGLQGK 1321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,497,140
Number of Sequences: 27780
Number of extensions: 443618
Number of successful extensions: 1812
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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