Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B03
(881 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g39420.1 68418.m04775 protein kinase family protein contains ... 31 1.3
At2g01220.2 68415.m00035 expressed protein 30 2.4
At2g01220.1 68415.m00034 expressed protein 30 2.4
At2g48160.1 68415.m06031 PWWP domain-containing protein 29 4.1
At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putati... 29 4.1
At5g06160.1 68418.m00687 splicing factor-related contains some s... 29 5.4
At2g41640.1 68415.m05145 expressed protein contains Pfam domain,... 29 5.4
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 9.5
At1g26650.1 68414.m03245 expressed protein 28 9.5
At1g23560.1 68414.m02964 expressed protein contains Pfam profile... 28 9.5
>At5g39420.1 68418.m04775 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 644
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 284 DFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 439
DFS+ +D + L+ L +S+ G L +GK E L+++ NI + +
Sbjct: 583 DFSQREEDSPKKTLEHLQFGKQSISGPLIFKSGKIDEILQRNESNIRQAVRK 634
>At2g01220.2 68415.m00035 expressed protein
Length = 388
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -1
Query: 497 SFSP--EGGGVLLDVQGGPCGAPRPCARCSASTVPKPP 390
SF+P EG LL+V CG PC SA KPP
Sbjct: 221 SFNPLHEGHLKLLEVAMSVCGGGYPCFEISAINADKPP 258
>At2g01220.1 68415.m00034 expressed protein
Length = 387
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -1
Query: 497 SFSP--EGGGVLLDVQGGPCGAPRPCARCSASTVPKPP 390
SF+P EG LL+V CG PC SA KPP
Sbjct: 220 SFNPLHEGHLKLLEVAMSVCGGGYPCFEISAINADKPP 257
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +2
Query: 71 PVRISSALSLSTVHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPH 217
P+R++ LS ST+H+ G + S ++L S P++DG+ + R H PH
Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPH 1235
>At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putative
/ HD-ZIP transcription factor, putative similar to
homeodomain leucine zipper protein GI:5006851 from
[Oryza sativa]
Length = 206
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 627 HPGGDQEDPGGRQRQAVSVDIELSHLINISFI 722
H D + GGR+R+ + + E SHL+ SFI
Sbjct: 55 HVNEDDSNSGGRRRKKLRLTKEQSHLLEESFI 86
>At5g06160.1 68418.m00687 splicing factor-related contains some
similarity to splicing factor SP:Q12874 from [Homo
sapiens]
Length = 504
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 80 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*XQQFNS 259
+SS L T + +V RL + + + + RL+QGHR H SI L ++
Sbjct: 1 MSSTLLEQTRSNHEEVERLERLVVEDLQKEPPSSKDRLVQGHRVRHMIESIMLTTEKLVE 60
Query: 260 LTKSKDAQDFSKAWKD 307
+ KD AW D
Sbjct: 61 TYEDKDG-----AWDD 71
>At2g41640.1 68415.m05145 expressed protein contains Pfam domain,
PF04577: Protein of unknown function (DUF563)
Length = 500
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 149 RSGPRSDGATRRSRLLQGHRTPHQGSSIRL*XQQFNSLTKSKDAQDFSKAWKDGSESVLQ 328
R+G RSD + + RT SSI L N+ TK + + +++ W+ +Q
Sbjct: 103 RTGLRSDICVMKGDV----RTNSASSSIFLFTSSTNNNTKPEKIKPYTRKWETSVMDTVQ 158
Query: 329 QLNAFAK 349
+LN K
Sbjct: 159 ELNLITK 165
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 449 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 345
P PRPC+R + P + RALPG W
Sbjct: 61 PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95
>At1g26650.1 68414.m03245 expressed protein
Length = 335
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -2
Query: 370 SERSLETLGEGVELLQHGLGAVLPSLAEVLC 278
S +LE L E V +L++ LGA++ + A ++C
Sbjct: 24 SSNALEILRETVRILRYNLGALMLTTAVLIC 54
>At1g23560.1 68414.m02964 expressed protein contains Pfam profile
PF02713: Domain of unknown function DUF220
Length = 332
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 508 VQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQ 654
+ T+QE K K NV+E + K KI+ AY++ ++ +++ K++Q
Sbjct: 34 MNQTIQEPLKAEFKRLRNVKELSLKSVSKIETAYEEH-RDEEKLEKQLQ 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,924,715
Number of Sequences: 28952
Number of extensions: 222529
Number of successful extensions: 847
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2077687200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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