Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B01
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    32   0.007
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   1.3  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    24   1.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.3  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 31.9 bits (69), Expect = 0.007
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +3

Query: 345 KKLKNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVESLKALNERL 497
           K+ KN  AA+ SRD ++AK DE+  +    +  N  L    ++LK   E+L
Sbjct: 141 KRRKNNEAAKRSRDARRAKEDEIAIRCAFLERENCHLKFVTDTLKKELEKL 191


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 414 ESQIRD-FKEMNDRLTSEVESLKALNERLISQNAALREVAAAQSVPGGQGP 563
           E QI+  F+    +L  E++++K LNE+   Q  A +  AAA +V     P
Sbjct: 264 ERQIKIWFQNRRMKLKKEIQAIKELNEQ-EKQAQAQKAAAAAAAVAAQVDP 313


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 414 ESQIRD-FKEMNDRLTSEVESLKALNERLISQNAALREVAAAQSVPGGQGP 563
           E QI+  F+    +L  E++++K LNE+   Q  A +  AAA +V     P
Sbjct: 46  ERQIKIWFQNRRMKLKKEIQAIKELNEQ-EKQAQAQKAAAAAAAVAAQVDP 95


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 279 ASPSPSRKRRLDHLTWEEKMQRKKLKNRVAA 371
           A+P+   + R DHL  E  +  +++ N  AA
Sbjct: 15  AAPAEFYESRYDHLDVESILNNRRMVNYYAA 45


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +2

Query: 329 RKNAKKETEKSR--GSTDFSRQKEGQDGRNGESDK 427
           +  +KK+ + S+     +    K  QDG NGE  K
Sbjct: 442 KPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKKK 476


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +2

Query: 329 RKNAKKETEKSR--GSTDFSRQKEGQDGRNGESDK 427
           +  +KK+ + S+     +    K  QDG NGE  K
Sbjct: 334 KPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKKK 368


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 678 NTSTPYMNLQTPSSXKLIQVLQERLNMSKPXKL 776
           NTST   N   P+S  L  +++E   M  P KL
Sbjct: 430 NTSTSSTNSNKPNSSDLNMLIKE--TMPLPRKL 460


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,354
Number of Sequences: 336
Number of extensions: 2667
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)