Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B01
(847 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 35 0.017
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 34 0.022
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 31 0.27
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.36
SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyc... 29 0.63
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.63
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 28 1.4
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 28 1.4
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 28 1.4
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 28 1.9
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 27 2.5
SPAC15A10.02 |taf12||transcription factor TFIID complex subunit ... 27 2.5
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 27 2.5
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 2.5
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 27 3.3
SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces pomb... 27 4.4
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 27 4.4
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 4.4
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 5.8
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 5.8
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 26 7.7
SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce... 26 7.7
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 34.7 bits (76), Expect = 0.017
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +3
Query: 327 EEKMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVESLKALNERLISQ 506
+E ++K +NR A + R RK+ + +E+Q+ KE++ T E + L+ +L +
Sbjct: 76 QEPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEE 135
Query: 507 NAALRE 524
L++
Sbjct: 136 LRILKD 141
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 34.3 bits (75), Expect = 0.022
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 294 SRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVES 473
S +R + T EEK + +NR AA R RKK + +++++ + N+ L+++V
Sbjct: 461 SSRRNSKNETDEEKRKSFLERNRQAALKCRQRKKQWLSNLQAKVEFYGNENEILSAQV-- 518
Query: 474 LKALNERLISQNAAL 518
AL E ++S L
Sbjct: 519 -SALREEIVSLKTLL 532
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 30.7 bits (66), Expect = 0.27
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 327 EEKMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVESLKALNERLISQ 506
+EK +R +NR+AA R +KK + E+E E + RL + L+ RL SQ
Sbjct: 10 DEKRRRILERNRIAASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLSQLQQEAFRLKSQ 69
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 30.3 bits (65), Expect = 0.36
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 354 KNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVESLK 479
KN TSR + DE+E Q++ ++N++ +++ LK
Sbjct: 130 KNVETEVTSRSTSSQEKDELEKQVKTLHDLNEQKDKKIKELK 171
>SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 209
Score = 29.5 bits (63), Expect = 0.63
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 333 KMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVESLK 479
K K +NR AAQ R +KK + ++ Q+ + N L L+
Sbjct: 123 KQSMLKARNRQAAQKCRIKKKKYLQTLQDQVNYYTSENKELLQSANDLR 171
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 0.63
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 354 KNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVESLKALNERLISQNAAL 518
KN A + + + K+ E + FK+ + L EVE+LK E+ ++N L
Sbjct: 1359 KNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRL 1413
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +3
Query: 405 DEMESQIRDFKEM---NDRLTSEVESLKALNERLISQNAALREVA 530
D + QIR +KE+ + + ++ L+ NERL+S+N LR A
Sbjct: 12 DLKKKQIRQYKEIIRISKAQSIRIKELQLENERLLSENIDLRTTA 56
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1328
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 470 ELESFEREVD*PERSATRSGGGAERPGW 553
ELE+FE+E+ E S T++ G +++P +
Sbjct: 341 ELENFEKEIFKAEVSETKNNGNSDKPSF 368
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 333 KMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVESLKALNERLISQN 509
K+ +KKLK+ D+K ++E E +++ E ++ ++ S L E+ ++Q+
Sbjct: 4 KLSKKKLKSLEYRSKKFDKKSQSLEEHEKKVQQKNEELEKKAADKISRDELPEKQLAQS 62
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 364 TRFFSFFLCIFSSHVRWSSRRFLD--GDGDATSRIISEXSS 248
TRFF + S + +W++++F + D TS + ++ SS
Sbjct: 695 TRFFRVIYIVLSKYTQWTTQKFFEEANKQDDTSEVQNDNSS 735
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +3
Query: 246 KEEXSDMILDVA-SPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDR-----KKAKMD 407
+E+ D LD + SP S+K ++ + +E +R+K K + + +D+ K+ K+D
Sbjct: 108 EEDLVDKSLDSSVSPVSSKKVKVRKTSGKESSKREKSKKKKEKKEKKDKLKKKSKRLKLD 167
Query: 408 EMESQIRDFK 437
+ +Q R K
Sbjct: 168 DSHTQKRKRK 177
>SPAC15A10.02 |taf12||transcription factor TFIID complex subunit A
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 27.5 bits (58), Expect = 2.5
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 225 VPNNYLVKEEXSDMILDVASPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKM 404
+PN L+++ S+ L +P PS R L +E Q L QT+++ +M
Sbjct: 80 LPNQQLLQQLQSNGALQQGTPEPSNTRPRPQLNAQE--QTMLLVRHRQLQTAQN-YLTEM 136
Query: 405 DEMESQIRDFKEMNDRL-TSEVESL 476
E +I++ N+RL TS E+L
Sbjct: 137 KEALGRIKNELSTNERLDTSAREAL 161
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 333 KMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVESLKALNERLIS 503
K R+K + + RDR A D S E +T E +LNE+L+S
Sbjct: 741 KRHRRKQSSSIPVLDLRDRSSAISDLSLSTASSVLEAQSLITPERPKRPSLNEKLLS 797
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 27.5 bits (58), Expect = 2.5
Identities = 21/108 (19%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Frame = +3
Query: 225 VPNNYLVKEEXSDMILDVASPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSR----DRK 392
+ +N +K+E + + S S + ++RL E+++Q K+ N++ + + DR+
Sbjct: 445 ITSNSQLKDEITS-LKQTVSESEAERKRLFSSAQEKQLQMKETVNKLTSLQEQNNEFDRQ 503
Query: 393 KAKMDE----MESQIRDFKEMNDRLTSEVESLKALNERLISQNAALRE 524
+ +E E ++ + +++ T + + L+ L E+L + L++
Sbjct: 504 LKEQEEDLQNKEEELTELRKLLREQTQDSQKLRLLVEQLELERQDLKQ 551
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/80 (20%), Positives = 38/80 (47%)
Frame = +3
Query: 267 ILDVASPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRDFKEMN 446
+LDV SP S R + ++ ++ KK+ + R + ++E+Q F+++
Sbjct: 211 LLDVHSPDNSNHRTMLNINNSSPIKPKKIFKPNEVKNRISRLQKTFADLENQHHSFQQIC 270
Query: 447 DRLTSEVESLKALNERLISQ 506
L +E+ + ++ +S+
Sbjct: 271 QTLRKRLENDSSTTKQRLSK 290
>SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 324 WEEKMQRKKLKNRVAAQTSRDRKKAKMDEM 413
WE+ + +A +TSRD KK K +++
Sbjct: 127 WEDDLASNSSPASIAKKTSRDSKKRKREDL 156
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 270 LDVASPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAK 401
++ S PS+K + D +EK + K K R A S + KK+K
Sbjct: 451 VETISEKPSKKEKKDK---KEKKKEKSKKKRSADDASEEVKKSK 491
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 225 VPNNYLVKEEXSDMILDVASPSPSRKRRLDHLTWEEKMQRKKLKNR 362
+ N EE D + P S LDH + E++MQ+ KN+
Sbjct: 318 IKNQLFKSEEEKDPVGKQKLPLESSLSPLDHSSAEKEMQKAPAKNK 363
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 5.8
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +3
Query: 327 EEKMQRKKLKNRVAAQTSRDRKKAKMDE----MESQIRDFKEMNDRLTSEVESLKALNER 494
++K ++KK K A +DRK K +E + S + + ND + + A +
Sbjct: 176 KDKKKKKKSKENDDAP-KKDRKTRKKEEKARKLASMLESENKDNDANAAPLNKTDAFKDG 234
Query: 495 LISQNAALREVAAAQSVPGGQGPAE 569
L S + + P G PA+
Sbjct: 235 LPSGRLIFAYASGQKVAPDGSNPAD 259
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 288 SPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRD-FKEMNDRLTSE 464
+PS K + EEK+ + + + + K+ ++ + E+++R +EM L +
Sbjct: 381 NPSAKLEEERALHEEKLMKMEAEMKTIFSQKVQEKEDRLKQSENELRTRHREMKAALEKQ 440
Query: 465 VESLKALNERLISQNAA 515
L RL+ AA
Sbjct: 441 KADLIDHKNRLMQAKAA 457
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 7.7
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 390 KKAKMDEMESQIRD-FKEMNDRLTSEVESLK-ALNERLISQ 506
K +K E ES ++D EMN RL ++ES + +N + S+
Sbjct: 510 KLSKQVEEESSMKDDLTEMNQRLKEQIESYENEVNSEITSR 550
>SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 218
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/66 (19%), Positives = 31/66 (46%)
Frame = +3
Query: 351 LKNRVAAQTSRDRKKAKMDEMESQIRDFKEMNDRLTSEVESLKALNERLISQNAALREVA 530
++ + Q ++ ++ +E++S +DF E++ + L L + SQN E
Sbjct: 132 MEKQFVLQKKKNELQSSTEEIDSTEKDFDELHKVILKVERELHTLRQNTPSQNEQ-AEAT 190
Query: 531 AAQSVP 548
++ +P
Sbjct: 191 PSKEIP 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,562,599
Number of Sequences: 5004
Number of extensions: 43066
Number of successful extensions: 180
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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