BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_A24 (946 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF292062-1|AAG39077.1| 291|Homo sapiens general transcription f... 32 3.5 X63469-1|CAA45069.1| 291|Homo sapiens transcription factor TFII... 31 4.6 S67861-1|AAB20414.1| 291|Homo sapiens general transcription fac... 31 4.6 BC030572-1|AAH30572.1| 291|Homo sapiens general transcription f... 31 4.6 >AF292062-1|AAG39077.1| 291|Homo sapiens general transcription factor protein. Length = 291 Score = 31.9 bits (69), Expect = 3.5 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Frame = +1 Query: 136 GLIAVALSSAVPKPS-TIKSKNVDAVFVEK-QKKILSFFQDVS-QLNTDDEYYKIGKDYD 306 G++ + A+P +K+ +FV + KK + FF D S Q + D+E+ K+ + Sbjct: 165 GILLEDIEEALPNXQKAVKAXGDQILFVNRPDKKKILFFNDKSCQFSVDEEFQKLWRSVT 224 Query: 307 IEMNMDNYTXXKAVEEFLK 363 ++ +MD + +EE+LK Sbjct: 225 VD-SMDE----EKIEEYLK 238 >X63469-1|CAA45069.1| 291|Homo sapiens transcription factor TFIIE beta protein. Length = 291 Score = 31.5 bits (68), Expect = 4.6 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Frame = +1 Query: 136 GLIAVALSSAVPKPS-TIKSKNVDAVFVEK-QKKILSFFQDVS-QLNTDDEYYKIGKDYD 306 G++ + A+P +K+ +FV + KK + FF D S Q + D+E+ K+ + Sbjct: 165 GILLEDIEEALPNSQKAVKALGDQILFVNRPDKKKILFFNDKSCQFSVDEEFQKLWRSVT 224 Query: 307 IEMNMDNYTXXKAVEEFLK 363 ++ +MD + +EE+LK Sbjct: 225 VD-SMDE----EKIEEYLK 238 >S67861-1|AAB20414.1| 291|Homo sapiens general transcription factor IIE 34 kda subunit protein. Length = 291 Score = 31.5 bits (68), Expect = 4.6 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Frame = +1 Query: 136 GLIAVALSSAVPKPS-TIKSKNVDAVFVEK-QKKILSFFQDVS-QLNTDDEYYKIGKDYD 306 G++ + A+P +K+ +FV + KK + FF D S Q + D+E+ K+ + Sbjct: 165 GILLEDIEEALPNSQKAVKALGDQILFVNRPDKKKILFFNDKSCQFSVDEEFQKLWRSVT 224 Query: 307 IEMNMDNYTXXKAVEEFLK 363 ++ +MD + +EE+LK Sbjct: 225 VD-SMDE----EKIEEYLK 238 >BC030572-1|AAH30572.1| 291|Homo sapiens general transcription factor IIE, polypeptide 2, beta 34kDa protein. Length = 291 Score = 31.5 bits (68), Expect = 4.6 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Frame = +1 Query: 136 GLIAVALSSAVPKPS-TIKSKNVDAVFVEK-QKKILSFFQDVS-QLNTDDEYYKIGKDYD 306 G++ + A+P +K+ +FV + KK + FF D S Q + D+E+ K+ + Sbjct: 165 GILLEDIEEALPNSQKAVKALGDQILFVNRPDKKKILFFNDKSCQFSVDEEFQKLWRSVT 224 Query: 307 IEMNMDNYTXXKAVEEFLK 363 ++ +MD + +EE+LK Sbjct: 225 VD-SMDE----EKIEEYLK 238 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 106,187,258 Number of Sequences: 237096 Number of extensions: 2021486 Number of successful extensions: 3308 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3215 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3308 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 12436574528 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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