Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A22
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1023 - 23710825-23710950,23711037-23711120,23711367-237114...    30   2.1  
05_07_0202 - 28378825-28379433,28382242-28382856                       29   5.0  

>08_02_1023 -
           23710825-23710950,23711037-23711120,23711367-23711492,
           23711593-23711712,23712046-23712153,23712243-23712395,
           23712505-23712600,23712716-23712800,23713278-23714268,
           23714870-23714915,23715806-23715964,23716516-23716651,
           23716734-23716900,23717366-23717696,23717827-23718062,
           23718326-23718514
          Length = 1050

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = +1

Query: 160 SFSPSFGVWLVLFAPFSHLKDKQRDYSSGVNINGSDLLVVLGCVLTWAQMNPLIGPRLSN 339
           S++  FG W V F P +   D++ +  S V +    L+   G ++ W+    L G  L  
Sbjct: 396 SWAAHFGRWGVFFPPPTPQADEEEEQGSSVEMLEELLIFTRGGLILWSSCRALGGAALKG 455

Query: 340 EXL 348
             +
Sbjct: 456 SPI 458


>05_07_0202 - 28378825-28379433,28382242-28382856
          Length = 407

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 97  DYSQTKYQLPPRWWIPK 47
           D  + KY +PPRWW+ K
Sbjct: 371 DALKDKYPVPPRWWVSK 387


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,153,914
Number of Sequences: 37544
Number of extensions: 345460
Number of successful extensions: 587
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)