Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A22
         (891 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   3.1  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   4.1  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    24   5.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.4  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 229 SVCPLGAKMGQIIPTTPQRMEKTKIGIRE*P 137
           S C + A +GQ IPT    M+   +G+   P
Sbjct: 236 SPCYMEATLGQQIPTNTTIMDSVSVGVPNIP 266


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +2

Query: 98  EIRKKYLNLSSQNGLLPYPDLRFLHPLGCGWYYLPHFR 211
           E+   + N     G LP+    F+HP  C  +Y  H R
Sbjct: 26  EVIPNHPNCPEMQGPLPH---YFIHPTNCSRFYECHMR 60


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 201 PIFAPKGQTEGLFKWC 248
           P++A KG+T+  + WC
Sbjct: 97  PVYAWKGETDEEYMWC 112


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +1

Query: 313 PLIGPRLSNEXLIWDFTHLGKQINNTQA*SSDLKVLQKFSWVG*ECYIDC 462
           PL G   + E L W+  +L + +      +SD+  + +FS    E  ++C
Sbjct: 193 PLHGAGCTPERLCWELHYLERCLRARIETASDITSVLRFSTKPTELILEC 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,327
Number of Sequences: 2352
Number of extensions: 13139
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)