Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_A20
(1232 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0603 - 11150739-11150746,11150791-11151340 31 2.5
07_03_0600 + 19866757-19867218,19867920-19868429 30 3.3
01_03_0005 + 11568545-11569119,11569179-11569191 30 3.3
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 4.3
02_05_0686 - 30900748-30902167,30903442-30904742 30 4.3
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.7
03_05_0067 - 20460206-20460703,20461255-20461530 29 5.7
01_06_1377 + 36764461-36765339 29 5.7
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 29 7.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 7.5
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 29 9.9
09_06_0083 + 20753191-20754480 29 9.9
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 29 9.9
01_06_1682 - 39130696-39131705,39132355-39132583 29 9.9
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 1096 PXXGGGXXPPPPLXVXFXXPPHQKYXFXXPPPP 1194
P G PPPPL F PP + PPPP
Sbjct: 55 PLPQSGVPPPPPLGSFFVPPPQSR---VPPPPP 84
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +1
Query: 1096 PXXGGGXX--PPPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGPXPP 1227
P GG PPPP PPH Y PP P + P PP
Sbjct: 7 PTMNGGHHAAPPPPQVSGAPPPPHGHYQQQPPPQP-YCQQQQPLPP 51
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 1105 GGGXXPPPPLXVXFXXPPHQKYXFXXPPPPFF 1200
GGG P PP F P+ + + PPPPF+
Sbjct: 133 GGGAYPTPPPPNPFL--PYFPFYYYSPPPPFY 162
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.9 bits (64), Expect = 4.3
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +1
Query: 1096 PXXGGGXXPPPPLXVXFXXPPHQK--YXFXXPP---PPFFFXXXGPXPP 1227
P GG P PP + PP Q+ Y PP PP F P PP
Sbjct: 12 PPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPP 60
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1120 PPPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGPXPP 1227
PPPP F P PPPP + P PP
Sbjct: 62 PPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPP 97
Score = 28.7 bits (61), Expect = 9.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1120 PPPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGPXPP 1227
P PP PP Y PPPP+ P PP
Sbjct: 74 PGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPP 109
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 1120 PPPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGPXPP 1227
PPPP PP K PPPP GP PP
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 1120 PPPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGPXP 1224
PPPP + F PP PPPP F P P
Sbjct: 234 PPPPPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWP 268
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 1120 PPPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGPXPP 1227
PPPP PP +Y PPPP G PP
Sbjct: 4 PPPPPQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPP 39
>01_06_1377 + 36764461-36765339
Length = 292
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 1123 PPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGPXPPK 1230
PPP + P Y F PPPP + P PP+
Sbjct: 155 PPPPEPQYPPPSSSPYYFPPPPPPAY---SAPPPPQ 187
>08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 1108 GGXXPPPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGPXPPK 1230
GG PP PHQ+ + PPPP + P PP+
Sbjct: 14 GGGGAPPQWGAIPPPVPHQQQQY-APPPPQMWGQAPPPPPQ 53
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 1105 GGGXXPPPPLXVXFXXPPHQKYXFXXPPPP 1194
GG PPPP PP + PPPP
Sbjct: 1158 GGPPAPPPPAGFRGGTPPPNAHGGVAPPPP 1187
>12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 1120 PPPPLXVXFXXPPHQKYXFXXPPPP 1194
PPP + V PP + F PPPP
Sbjct: 47 PPPVIRVFAAAPPPPRAAFFAPPPP 71
>09_06_0083 + 20753191-20754480
Length = 429
Score = 28.7 bits (61), Expect = 9.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 1120 PPPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGPXPP 1227
PPPP + P Q PP P F P PP
Sbjct: 262 PPPPPADTYPVSPDQPLYSSPPPAPTAFVPHTPLPP 297
>01_06_1731 + 39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 1144 FXXPPHQKYXFXXPPPPFFFXXXGPXPP 1227
F PHQ Y PPPP+ P PP
Sbjct: 37 FQQLPHQLYCPQPPPPPYQVMPVPPPPP 64
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 28.7 bits (61), Expect = 9.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 1120 PPPPLXVXFXXPPHQKYXFXXPPPPFFFXXXGP 1218
PPPP PP KY PPP++F P
Sbjct: 259 PPPPYGYNSPIPPTNKYL----PPPYYFNSPPP 287
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,970,496
Number of Sequences: 37544
Number of extensions: 283909
Number of successful extensions: 702
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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