Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A19
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726...   157   1e-38
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264...   156   2e-38
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894...    29   5.9  
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892...    28   7.8  

>07_01_0875 -
           7265529-7265588,7265681-7265746,7266008-7266293,
           7267138-7267142
          Length = 138

 Score =  157 bits (381), Expect = 1e-38
 Identities = 74/128 (57%), Positives = 93/128 (72%)
 Frame = +1

Query: 106 VAVPXXPILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDE 285
           V  P  P+L G    +  ALQ V+K +  H GLV GL EAAKA++K  A LCVLAE CD+
Sbjct: 7   VEAPPAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQ 65

Query: 286 AAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 465
             Y KLV+ALC EH + LV V + K LGEWAGLCKID +GKARK+VGCSCVV+KDFGEE+
Sbjct: 66  PDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEES 125

Query: 466 PALDVLKE 489
             L+++++
Sbjct: 126 EGLNIVQD 133


>07_01_0360 +
           2646279-2646283,2647113-2647398,2648043-2648108,
           2648199-2648258
          Length = 138

 Score =  156 bits (378), Expect = 2e-38
 Identities = 73/128 (57%), Positives = 93/128 (72%)
 Frame = +1

Query: 106 VAVPXXPILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDE 285
           V  P  P+L G    +  ALQ V+K +  H GLV GL EAAKA++K  A LCVLAE CD+
Sbjct: 7   VETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQ 65

Query: 286 AAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEET 465
             Y KLV+ALC EH + LV V + K LGEWAGLCKID +GKARK+VGCSCVV+KD+GEE+
Sbjct: 66  PDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEES 125

Query: 466 PALDVLKE 489
             L+++++
Sbjct: 126 EGLNIVQD 133


>09_04_0677 -
           19388888-19389019,19389124-19389216,19389317-19389445,
           19389559-19389728,19390280-19390481,19390576-19390623,
           19390797-19390799
          Length = 258

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +1

Query: 208 HGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 369
           +GL+     +++ +A L V+A   D       + ALC + ++P   V    +LG
Sbjct: 130 YGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLG 183


>01_07_0018 -
           40488702-40488833,40488928-40489020,40489125-40489253,
           40489379-40489500,40490292-40490544,40490636-40490638
          Length = 243

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +1

Query: 208 HGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 369
           +GL      +++ +A L V+A   D       + ALC + +IP   V    +LG
Sbjct: 115 YGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLG 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,210,490
Number of Sequences: 37544
Number of extensions: 287333
Number of successful extensions: 720
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)