Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A19
         (822 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)              160   1e-39
SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.023
SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.)               37   0.023
SB_33518| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.5  
SB_39360| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24)        29   4.6  
SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.0  

>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
          Length = 427

 Score =  160 bits (388), Expect = 1e-39
 Identities = 73/105 (69%), Positives = 86/105 (81%)
 Frame = +1

Query: 133 SGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLVQA 312
           +G    +  ALQ VLK ALIH GL  GLHEAAK+LDK +A LC+L+  CDEA Y KLV+A
Sbjct: 15  AGGAMDINTALQEVLKTALIHDGLSRGLHEAAKSLDKREAHLCILSNNCDEAMYVKLVEA 74

Query: 313 LCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 447
           LC EH IPL+KVD++KKLGEWAGLCKIDK+GKARK+VGCSCVV+K
Sbjct: 75  LCAEHGIPLLKVDDSKKLGEWAGLCKIDKEGKARKVVGCSCVVVK 119


>SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 68

 Score = 36.7 bits (81), Expect = 0.023
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = +1

Query: 238 DKXQAVLCVLAEX--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 381
           D     LCVL E    D     + +L++A C E+ IP+VKVD+++KL   AG
Sbjct: 2   DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53


>SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 104

 Score = 36.7 bits (81), Expect = 0.023
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = +1

Query: 238 DKXQAVLCVLAEX--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 381
           D     LCVL E    D     + +L++A C E+ IP+VKVD+++KL   AG
Sbjct: 2   DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53


>SB_33518| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 455

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 360 FVVVNLDKWNLMFVAQSLNKFLVCSFITVLSQNT*YCLPLVKSFSGFV 217
           F  VNL +W++ F A +L+++ +C F TV       C   V  F  F+
Sbjct: 256 FQAVNLSRWSMCFQAVNLSRWFMC-FQTVNLSRWFMCFQAVNLFRWFM 302


>SB_39360| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 209

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 444 DDNTGAADNFPCLAILVNLAETSPFSKLF 358
           DD    +D +PC+ I+VN++ T   +K F
Sbjct: 10  DDGLTCSDVYPCVEIMVNISSTGSETKKF 38


>SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24)
          Length = 172

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +1

Query: 208 HGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 372
           +G++     ++  +A L V+A   D       + ALC + Q+P   V    +LG+
Sbjct: 47  YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 101


>SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 263

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +1

Query: 208 HGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 372
           +G++     ++  +A L V+A   D       + ALC + Q+P   V    +LG+
Sbjct: 138 YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 192


>SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 996

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 132 QDGVGGDRDXNXSQGX*RXDXXADREKAXK 43
           +DG GGD+D    +G  + D   ++EK  K
Sbjct: 862 EDGKGGDKDKEDKEGKNKEDNEKEKEKKGK 891


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,683,250
Number of Sequences: 59808
Number of extensions: 340424
Number of successful extensions: 747
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2299585728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)