Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_A19
(822 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 174 4e-43
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 174 4e-43
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 174 4e-43
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 174 4e-43
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 174 4e-43
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 165 1e-40
M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and DNA-dam... 42 0.004
L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein. 42 0.004
BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and DNA-d... 42 0.004
AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and DNA-d... 42 0.004
AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and DNA-d... 42 0.004
CR457038-1|CAG33319.1| 159|Homo sapiens GADD45G protein. 35 0.41
BT007234-1|AAP35898.1| 159|Homo sapiens growth arrest and DNA-d... 35 0.41
BC019325-1|AAH19325.1| 159|Homo sapiens growth arrest and DNA-d... 35 0.41
BC000465-1|AAH00465.1| 159|Homo sapiens growth arrest and DNA-d... 35 0.41
AL161910-2|CAH71791.1| 159|Homo sapiens growth arrest and DNA-d... 35 0.41
AL161910-1|CAH71790.1| 141|Homo sapiens growth arrest and DNA-d... 35 0.41
AF494037-1|AAM00007.1| 159|Homo sapiens growth arrest and DNA-d... 35 0.41
AF265659-1|AAF73468.1| 159|Homo sapiens GADD45 gamma protein. 35 0.41
AF079806-1|AAD28544.1| 159|Homo sapiens cytokine responsive pro... 35 0.41
AF078078-1|AAC83329.1| 159|Homo sapiens growth arrest and DNA-d... 35 0.41
D83023-1|BAA84543.1| 159|Homo sapiens gadd45-related protein pr... 34 0.71
AF087883-1|AAK00414.1| 159|Homo sapiens growth arrest and DNA d... 34 0.71
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 174 bits (423), Expect = 4e-43
Identities = 81/121 (66%), Positives = 95/121 (78%)
Frame = +1
Query: 127 ILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLV 306
I +G V ALQ VLK ALIH GL G+ EAAKALDK QA LCVLA CDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 307 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 486
+ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125
Query: 487 E 489
E
Sbjct: 126 E 126
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 174 bits (423), Expect = 4e-43
Identities = 81/121 (66%), Positives = 95/121 (78%)
Frame = +1
Query: 127 ILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLV 306
I +G V ALQ VLK ALIH GL G+ EAAKALDK QA LCVLA CDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 307 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 486
+ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125
Query: 487 E 489
E
Sbjct: 126 E 126
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 174 bits (423), Expect = 4e-43
Identities = 81/121 (66%), Positives = 95/121 (78%)
Frame = +1
Query: 127 ILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLV 306
I +G V ALQ VLK ALIH GL G+ EAAKALDK QA LCVLA CDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 307 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 486
+ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125
Query: 487 E 489
E
Sbjct: 126 E 126
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 174 bits (423), Expect = 4e-43
Identities = 81/121 (66%), Positives = 95/121 (78%)
Frame = +1
Query: 127 ILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLV 306
I +G V ALQ VLK ALIH GL G+ EAAKALDK QA LCVLA CDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 307 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 486
+ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125
Query: 487 E 489
E
Sbjct: 126 E 126
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 174 bits (423), Expect = 4e-43
Identities = 81/121 (66%), Positives = 95/121 (78%)
Frame = +1
Query: 127 ILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLV 306
I +G V ALQ VLK ALIH GL G+ EAAKALDK QA LCVLA CDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 307 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 486
+ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125
Query: 487 E 489
E
Sbjct: 126 E 126
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 165 bits (402), Expect = 1e-40
Identities = 78/121 (64%), Positives = 92/121 (76%)
Frame = +1
Query: 127 ILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLV 306
I +G V ALQ VLK ALIH GL G+ EAAKALDK QA LCV A CDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 307 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 486
+AL EHQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIE 125
Query: 487 E 489
E
Sbjct: 126 E 126
>M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible protein protein.
Length = 165
Score = 41.5 bits (93), Expect = 0.004
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDE------AAYKKLVQAL 315
AL+ VL AL + G++EAAK L D VLC+LA D+ + L+QA
Sbjct: 22 ALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAF 81
Query: 316 CNEHQIPLVKVDNNKKLGE 372
C E+ I +++V N +L E
Sbjct: 82 CCENDINILRVSNPGRLAE 100
>L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein.
Length = 165
Score = 41.5 bits (93), Expect = 0.004
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDE------AAYKKLVQAL 315
AL+ VL AL + G++EAAK L D VLC+LA D+ + L+QA
Sbjct: 22 ALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAF 81
Query: 316 CNEHQIPLVKVDNNKKLGE 372
C E+ I +++V N +L E
Sbjct: 82 CCENDINILRVSNPGRLAE 100
>BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 41.5 bits (93), Expect = 0.004
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDE------AAYKKLVQAL 315
AL+ VL AL + G++EAAK L D VLC+LA D+ + L+QA
Sbjct: 22 ALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAF 81
Query: 316 CNEHQIPLVKVDNNKKLGE 372
C E+ I +++V N +L E
Sbjct: 82 CCENDINILRVSNPGRLAE 100
>AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 41.5 bits (93), Expect = 0.004
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDE------AAYKKLVQAL 315
AL+ VL AL + G++EAAK L D VLC+LA D+ + L+QA
Sbjct: 22 ALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAF 81
Query: 316 CNEHQIPLVKVDNNKKLGE 372
C E+ I +++V N +L E
Sbjct: 82 CCENDINILRVSNPGRLAE 100
>AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 41.5 bits (93), Expect = 0.004
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDE------AAYKKLVQAL 315
AL+ VL AL + G++EAAK L D VLC+LA D+ + L+QA
Sbjct: 22 ALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAF 81
Query: 316 CNEHQIPLVKVDNNKKLGE 372
C E+ I +++V N +L E
Sbjct: 82 CCENDINILRVSNPGRLAE 100
>CR457038-1|CAG33319.1| 159|Homo sapiens GADD45G protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>BT007234-1|AAP35898.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>BC019325-1|AAH19325.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>BC000465-1|AAH00465.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AL161910-2|CAH71791.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AL161910-1|CAH71790.1| 141|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 141
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 7 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 66
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 67 CCENDIDIVRVGDVQRLAAIVG 88
>AF494037-1|AAM00007.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AF265659-1|AAF73468.1| 159|Homo sapiens GADD45 gamma protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AF079806-1|AAD28544.1| 159|Homo sapiens cytokine responsive
protein protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AF078078-1|AAC83329.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible protein GADD45gamma protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>D83023-1|BAA84543.1| 159|Homo sapiens gadd45-related protein
protein.
Length = 159
Score = 33.9 bits (74), Expect = 0.71
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAHGQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AF087883-1|AAK00414.1| 159|Homo sapiens growth arrest and DNA
damage inducible protein gamma protein.
Length = 159
Score = 33.9 bits (74), Expect = 0.71
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 ALQAVLKPALIHGGLVHGLHEAAKAL--DKXQAVLCVLAEXCDEAA------YKKLVQAL 315
AL +L A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAHGQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 316 CNEHQIPLVKVDNNKKLGEWAG 381
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,274,666
Number of Sequences: 237096
Number of extensions: 1633046
Number of successful extensions: 3006
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3003
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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