Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_A19
(822 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 188 1e-47
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 188 1e-47
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 188 1e-47
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 188 1e-47
BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p pro... 49 7e-06
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 35 0.12
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 35 0.12
AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p pro... 31 2.5
AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA... 31 2.5
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 188 bits (457), Expect = 1e-47
Identities = 91/134 (67%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Frame = +1
Query: 91 LAXVAVAVPXX-PILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVL 267
+A V V VP P+L G + ALQ VLK +LI GLVHG+H+A KALDK QAVLC+L
Sbjct: 13 MADVDVDVPSAAPVLDG-AMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 71
Query: 268 AEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 447
AE DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 72 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 131
Query: 448 DFGEETPALDVLKE 489
DFGEETPALDV+K+
Sbjct: 132 DFGEETPALDVVKD 145
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 188 bits (457), Expect = 1e-47
Identities = 91/134 (67%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Frame = +1
Query: 91 LAXVAVAVPXX-PILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVL 267
+A V V VP P+L G + ALQ VLK +LI GLVHG+H+A KALDK QAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDG-AMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 268 AEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 447
AE DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 448 DFGEETPALDVLKE 489
DFGEETPALDV+K+
Sbjct: 120 DFGEETPALDVVKD 133
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 188 bits (457), Expect = 1e-47
Identities = 91/134 (67%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Frame = +1
Query: 91 LAXVAVAVPXX-PILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVL 267
+A V V VP P+L G + ALQ VLK +LI GLVHG+H+A KALDK QAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDG-AMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 268 AEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 447
AE DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 448 DFGEETPALDVLKE 489
DFGEETPALDV+K+
Sbjct: 120 DFGEETPALDVVKD 133
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 188 bits (457), Expect = 1e-47
Identities = 91/134 (67%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Frame = +1
Query: 91 LAXVAVAVPXX-PILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDKXQAVLCVL 267
+A V V VP P+L G + ALQ VLK +LI GLVHG+H+A KALDK QAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDG-AMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 268 AEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 447
AE DE YKKLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 448 DFGEETPALDVLKE 489
DFGEETPALDV+K+
Sbjct: 120 DFGEETPALDVVKD 133
>BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p
protein.
Length = 127
Score = 49.2 bits (112), Expect = 7e-06
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 91 LAXVAVAVPXX-PILSGHXXXVXVALQAVLKPALIHGGLVHGLHEAAKALDK 243
+A V V VP P+L G + ALQ VLK +LI GL+HG+H+A KALDK
Sbjct: 17 MADVDVDVPSAAPVLDG-AMDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 172 VLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVD 351
+L+ AL + L G +EA K L++ A + VLA + + LC + +P V V
Sbjct: 24 LLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVR 83
Query: 352 NNKKLGEWAGLCK 390
+ + LG G+ +
Sbjct: 84 SKQALGRACGVSR 96
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 172 VLKPALIHGGLVHGLHEAAKALDKXQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVD 351
+L+ AL + L G +EA K L++ A + VLA + + LC + +P V V
Sbjct: 24 LLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVR 83
Query: 352 NNKKLGEWAGLCK 390
+ + LG G+ +
Sbjct: 84 SKQALGRACGVSR 96
>AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p
protein.
Length = 163
Score = 30.7 bits (66), Expect = 2.5
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Frame = +1
Query: 163 LQAVLKPALIHGGLVHGLHEAAKALDKXQ--AVLCVLAEXCD-EAA---YKKLVQALCNE 324
+++ L A ++ GL A L K ++ C++A+ D ++A ++ L++A C E
Sbjct: 35 IKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEAFCYE 94
Query: 325 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKI 420
+ I ++KVD+ KL G ++ +K+
Sbjct: 95 NDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126
>AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA
protein.
Length = 163
Score = 30.7 bits (66), Expect = 2.5
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Frame = +1
Query: 163 LQAVLKPALIHGGLVHGLHEAAKALDKXQ--AVLCVLAEXCD-EAA---YKKLVQALCNE 324
+++ L A ++ GL A L K ++ C++A+ D ++A ++ L++A C E
Sbjct: 35 IKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEAFCYE 94
Query: 325 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKI 420
+ I ++KVD+ KL G ++ +K+
Sbjct: 95 NDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,535,487
Number of Sequences: 53049
Number of extensions: 488190
Number of successful extensions: 1097
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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