Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A16
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0084 + 8266564-8266699,8267497-8267685,8267772-8267911,826...    28   8.6  

>05_03_0084 +
           8266564-8266699,8267497-8267685,8267772-8267911,
           8268130-8268225,8268327-8268388,8268559-8268634,
           8268709-8268785,8268866-8268899,8268983-8269132,
           8269222-8269356,8269450-8269533
          Length = 392

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
 Frame = +2

Query: 362 PAQKHLFKRFL---EVVRTATSEYEAFKLNTIPXESI---SMLCYPPSLILRKSIF 511
           P  K   +RFL   +V   A   +  F  N I   S+   S++CY PSLI   SIF
Sbjct: 252 PTTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICYVPSLIAASSIF 307


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,871,948
Number of Sequences: 37544
Number of extensions: 310185
Number of successful extensions: 706
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)