Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_A15
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0259 - 1996427-1998772 31 1.2
02_01_0020 - 127572-127637,127760-127819,127903-128004,128099-12... 31 1.6
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649 29 3.7
08_02_0272 + 15189617-15190276,15190361-15191107 29 4.9
03_01_0273 - 2107778-2108772,2108857-2109043,2109121-2110575,211... 29 4.9
05_03_0469 + 14439472-14440905 29 6.5
11_04_0358 + 16725417-16725422,16725789-16725858,16727825-167286... 28 8.6
04_03_0694 + 18781776-18781994,18782475-18782648,18782743-187830... 28 8.6
03_05_0823 - 27970038-27970258,27970279-27970544,27970608-279706... 28 8.6
03_02_0950 + 12661008-12662312,12662403-12662576 28 8.6
01_07_0312 + 42677752-42678561,42678701-42678910,42679597-426797... 28 8.6
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 8.6
>03_01_0259 - 1996427-1998772
Length = 781
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 401 IFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSK 505
I ++ V++ N HHALKLI + + +I GDSK
Sbjct: 732 ILVKKNVRICN-HCHHALKLISRYSGRRIVVGDSK 765
>02_01_0020 -
127572-127637,127760-127819,127903-128004,128099-128194,
128649-128756,128849-128899,129018-130118
Length = 527
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +1
Query: 169 DDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMELRLPVMD 348
DD+L E+L + + + E +A+ ++ KKG V++E +K L+E T R P+
Sbjct: 310 DDLLIEKL--NSIEKKIEEKLAEL-DHTFGKKGRVLEEEIKDLVEERNSLTEHKRRPMYR 366
Query: 349 KGW 357
KG+
Sbjct: 367 KGF 369
>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
Length = 461
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 469 LVDQLEGVMVPFVYELDSLLGEDHSKLDG 383
+V GVM P + +L LLGE+++KL G
Sbjct: 7 IVGATTGVMKPLLSKLTKLLGEEYAKLKG 35
>08_02_0272 + 15189617-15190276,15190361-15191107
Length = 468
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 721 HDVAFVHGGLKVPVVFEGVSGAITVDDTVITRTFRVIELQVLFVLGGHDLEVNSVVF 551
HD++F HG L++P + VDDT + F ++ + L G + EV + VF
Sbjct: 300 HDISFRHGALRIP--------RLAVDDTTEHKLFSLMAFEQLHGAGAN--EVTAYVF 346
>03_01_0273 -
2107778-2108772,2108857-2109043,2109121-2110575,
2110670-2111251
Length = 1072
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Frame = -3
Query: 330 KFHGVPLAVFDQTLHGFLDNLSLLFLQIFRAFGDSG-----------LVFTNDDTHIQLL 184
+F G+P+AV D + D + +FL+ G L N D+ I L
Sbjct: 707 EFFGIPVAVRDDLVQDLADGMEAIFLEYISFLTSCGSKQSYLPSLPPLTRCNQDSKIIRL 766
Query: 183 RQYVISSWCKCGVRSQRTHGEDEGK 109
+ + C+ V S R HG +G+
Sbjct: 767 WKKAATP-CRAPVSSPRAHGHHQGQ 790
>05_03_0469 + 14439472-14440905
Length = 477
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 495 VTPKTKPARKSPGS--LPPCWKTTEFTSRSCPP 587
+T T+ AR PG+ +PP W+ T+RS PP
Sbjct: 187 LTAVTEFARGVPGAPTVPPVWEREALTTRSWPP 219
>11_04_0358 +
16725417-16725422,16725789-16725858,16727825-16728693,
16729109-16729198,16730071-16730356,16730573-16730592
Length = 446
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 646 DDTVITRTFRVIELQVLFVLGGHDLEVNSVVFQHGGKLPGDFLAGFVFG 500
DDT V+ ++ VLGG D+ V F GG + L GF+FG
Sbjct: 155 DDTTTEDDLMVVSAELEKVLGGVDVASARVSFAMGGGVDCP-LQGFLFG 202
>04_03_0694 +
18781776-18781994,18782475-18782648,18782743-18783057,
18783791-18785569,18786334-18786651,18787052-18787105
Length = 952
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 187 QLYMSVVI---GEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMELRLPVMDKG 354
+LY+ +++ G Y+ A+ S + G +KE K L+E+ T+E+ L + G
Sbjct: 491 ELYLKILLEDLGRYDEALQYISSLEANQAGLTVKEYGKILVEHRPAETVEILLRLCTDG 549
>03_05_0823 -
27970038-27970258,27970279-27970544,27970608-27970657,
27971272-27971538,27971633-27972001,27972373-27973278
Length = 692
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/55 (23%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 229 IAKCSEYLKEKKGEVIK--EAVKRLIENGKRNTMELRLPVMDKGWKGNRQILLPH 387
+ +C+ ++ + G ++ ++ I G +T+ + LPV+++ + NR I++PH
Sbjct: 176 LEECALWMPSRSGSSLQLSHTLRHQITVG--STVSINLPVVNQVFSSNRAIIIPH 228
>03_02_0950 + 12661008-12662312,12662403-12662576
Length = 492
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 172 DVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEV 273
+VL+ + +GEY+ AIA CS+ L++ K V
Sbjct: 411 EVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNV 444
>01_07_0312 +
42677752-42678561,42678701-42678910,42679597-42679704,
42679915-42680010,42680090-42680182,42680276-42680386,
42680482-42680514,42680592-42680642,42680960-42681037,
42681145-42681165
Length = 536
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -1
Query: 233 AIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSSSFLAQWL 75
A+ + S M T+ + C+AS +S + ALE A ++ NK + F Q++
Sbjct: 465 ALENNCSHMETVFHVCTASVTSEIAEDKALELIAKAVESRMNK--AKFYEQYI 515
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 485 IAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLDNT 619
I F D K+K K K +EN+ + F +M+ D QYL +NT
Sbjct: 354 ILFNDMKEKGVKSGK-KCVLSMENHGIGFLLMAYNDVQYLVPNNT 397
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,417,619
Number of Sequences: 37544
Number of extensions: 499623
Number of successful extensions: 1637
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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