Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A15
         (887 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g29080.1 68416.m03641 hypothetical protein                          34   0.11 
At1g62250.2 68414.m07023 expressed protein                             30   1.8  
At1g62250.1 68414.m07022 expressed protein                             30   1.8  
At3g28790.1 68416.m03593 expressed protein                             29   3.1  
At1g77240.1 68414.m08996 AMP-binding protein, putative strong si...    29   4.1  
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A...    29   5.4  
At1g64150.1 68414.m07267 expressed protein contains Pfam profile...    29   5.4  
At3g52990.1 68416.m05841 pyruvate kinase, putative similar to py...    28   7.2  
At2g23190.1 68415.m02770 cytochrome P450, putative Similar to  C...    28   7.2  
At1g47310.1 68414.m05238 expressed protein                             28   7.2  
At3g12775.1 68416.m01595 ubiquitin-conjugating enzyme family pro...    28   9.5  
At1g64880.1 68414.m07355 ribosomal protein S5 family protein con...    28   9.5  

>At3g29080.1 68416.m03641 hypothetical protein
          Length = 445

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 252 EGKEGRGYQGSREASDRKRQEEHHGTSPTSYGQRMERK 365
           E +EG GY    EA D +R+ +H  TS ++ G   ERK
Sbjct: 395 EAEEGSGYHQRWEALDSRRKHDHSRTSGSALGTGTERK 432


>At1g62250.2 68414.m07023 expressed protein
          Length = 223

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 104 LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 232
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At1g62250.1 68414.m07022 expressed protein
          Length = 267

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 104 LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 232
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At3g28790.1 68416.m03593 expressed protein 
          Length = 608

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -1

Query: 191 SCSASTSSVLGASVALEASAHTARTKANKVSSSFLAQWLFFESKSTTTQXLKNSLV 24
           S  AS S+  GAS + E SA + + ++N  SSS  +     +   T T    NS +
Sbjct: 402 SAGASASASAGASASAEESAASQKKESNSKSSSSSSSTTSVKEVETQTSSEVNSFI 457


>At1g77240.1 68414.m08996 AMP-binding protein, putative strong
           similarity to AMP-binding protein GI:1903034 from
           [Brassica napus]; contains Pfam AMP-binding domain
           PF00501
          Length = 545

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +2

Query: 368 VKSYFPIQFRVIFTEQTVKLINKR-DHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTP 544
           V S + +QF V  +   +  IN R D HAL ++ + + +K+ F D    +    +  F P
Sbjct: 76  VPSVYELQFAVPMSGAVLNNINPRLDAHALSVLLRHSESKLVFVDHHSSSLVLEAVSFLP 135

Query: 545 VLENNRV 565
             E  R+
Sbjct: 136 KDERPRL 142


>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
           Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
           thaliana]; similar to cytochrome P450LXXIA1, Persea
           americana, M32885
          Length = 490

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 451 GVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 359
           G  +P +  +D + G+DH   + + RFD+FL
Sbjct: 221 GEYIPSLSWIDKIRGQDHKMEEVDKRFDEFL 251


>At1g64150.1 68414.m07267 expressed protein contains Pfam profile
           PF01169: Uncharacterized protein family UPF0016
          Length = 370

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 670 GVSGAITVDDTVITRTFRVIELQVLFVLGGHDLEVNSV 557
           G  G +T+   V+ RTF  ++  + F  GG DL ++ +
Sbjct: 197 GALGIMTIISVVLGRTFHYVDEVLPFRFGGTDLPIDDI 234


>At3g52990.1 68416.m05841 pyruvate kinase, putative similar to
           pyruvate kinase, cytosolic isozyme [Glycine max]
           SWISS-PROT:Q42806
          Length = 527

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 835 LGITGNFSAVPQGFTVFVGGHIFIKCHNTGVLSVVDE 725
           +   G   AV +G T+FVG ++F     T V   VDE
Sbjct: 133 INFNGLAKAVKKGDTIFVGQYLFTGSETTSVWLEVDE 169


>At2g23190.1 68415.m02770 cytochrome P450, putative Similar to
           Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
          Length = 543

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -1

Query: 362 PFHPLSITGRRSSMVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVS 219
           P  PL   G    +   L  +   F+ SL  +P FS R   HL + VS
Sbjct: 79  PARPLPFIGHLHLLKQPLHRTFLSFSQSLGDAPIFSLRLGNHLTVVVS 126


>At1g47310.1 68414.m05238 expressed protein
          Length = 395

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = +2

Query: 407 TEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMST 586
           T QTV  +  +   A  ++  Q   + + G ++   SKKV+W+  P +E  RV+F++ + 
Sbjct: 286 TRQTVSSVTAK-LKASGMVRFQLEIERSIGKNESVISKKVAWRTKPKIE--RVWFEVTAK 342

Query: 587 EDKQYLK 607
            +   LK
Sbjct: 343 IEGDKLK 349


>At3g12775.1 68416.m01595 ubiquitin-conjugating enzyme family
           protein contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 362

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 497 DSKDKTSKKVSWKFTPVLENNRVYF-KIMSTEDKQYLKLDNTKGSSDDRIIYGDSTAD 667
           D +++  KK+ WK     E N+VY  +I++++ K  L+    K  +     YG S+++
Sbjct: 277 DMEEERDKKMFWKMYFAFEGNKVYCEQILNSDLKAELEKLKEKEYTLSDYYYGSSSSN 334


>At1g64880.1 68414.m07355 ribosomal protein S5 family protein
           contains similarity to 30S ribosomal protein S5
           GI:6969105 from [Campylobacter jejuni]
          Length = 515

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/63 (26%), Positives = 36/63 (57%)
 Frame = +1

Query: 169 DDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMELRLPVMD 348
           DD+L E+L  + +  + E  +++  ++   KKG+ ++E ++ L E+    T + R P+  
Sbjct: 299 DDILLEKL--NAIDKKLEIKLSEL-DHTFGKKGKRLEEEIRELAEDRNALTEKKRQPLYR 355

Query: 349 KGW 357
           KG+
Sbjct: 356 KGY 358


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,835,116
Number of Sequences: 28952
Number of extensions: 406088
Number of successful extensions: 1416
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)