Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A11
         (877 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius...    46   0.001
UniRef50_Q49549 Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 -...    38   0.25 
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus...    36   1.0  
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ...    36   1.8  
UniRef50_Q12IA3 Cluster: Putative uncharacterized protein precur...    33   7.2  
UniRef50_A3ZU56 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
           melpomene|Rep: Ribosomal protein L23a - Heliconius
           melpomene
          Length = 221

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 20/33 (60%), Positives = 22/33 (66%)
 Frame = +2

Query: 770 VXFRXPXXFEPPXHPKXPXKFLXKKNRXDAYKI 868
           V FR P  FEPP +PK P K L K+NR DAY I
Sbjct: 178 VHFRRPKTFEPPRNPKYPRKSLPKRNRMDAYNI 210


>UniRef50_Q49549 Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 -
           Mycoplasma hyorhinis
          Length = 1187

 Score = 38.3 bits (85), Expect = 0.25
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 190 TCVSQNTGTCPESSCACPETSCACPE 267
           +C  ++ G C E SCACP T+CAC E
Sbjct: 380 SCAQEHCG-CQEESCACPNTTCACTE 404



 Score = 38.3 bits (85), Expect = 0.25
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 190 TCVSQNTGTCPESSCACPETSCACPE 267
           +C  ++ G C E SCACP T+CAC E
Sbjct: 836 SCAQEHCG-CQEESCACPNTTCACTE 860



 Score = 34.3 bits (75), Expect = 4.1
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 190 TCVSQN-TGTCPESSCACPETSCACPET 270
           TC  Q  T +C +  C C E SCACP T
Sbjct: 371 TCGCQEATCSCAQEHCGCQEESCACPNT 398



 Score = 34.3 bits (75), Expect = 4.1
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 190 TCVSQN-TGTCPESSCACPETSCACPET 270
           TC  Q  T +C +  C C E SCACP T
Sbjct: 827 TCGCQEATCSCAQEHCGCQEESCACPNT 854


>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
           cervinus|Rep: Ribosomal protein L23Ae - Dascillus
           cervinus
          Length = 212

 Score = 36.3 bits (80), Expect = 1.0
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 770 VXFRXPXXFEPPXHPKXPXKFLXKKNRXDAYKI 868
           V F  P  F PP +PK P K +  ++R DAY I
Sbjct: 168 VHFHRPKTFRPPRNPKYPRKSVPTRSRMDAYNI 200


>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
           protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to ribosomal protein L23Ae - Nasonia vitripennis
          Length = 247

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 770 VXFRXPXXFEPPXHPKXPXKFLXKKNRXDAYKI 868
           V F  P  F PP +PK P K +  +NR DA  I
Sbjct: 135 VHFHRPKTFRPPRNPKYPRKSVPNRNRMDAVNI 167


>UniRef50_Q12IA3 Cluster: Putative uncharacterized protein
           precursor; n=1; Shewanella denitrificans OS217|Rep:
           Putative uncharacterized protein precursor - Shewanella
           denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
          Length = 149

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 199 SQNTGTCPESSCACPETSC 255
           SQN+G C E+SC CP +SC
Sbjct: 87  SQNSGDCCENSCRCPVSSC 105


>UniRef50_A3ZU56 Cluster: Putative uncharacterized protein; n=1;
           Blastopirellula marina DSM 3645|Rep: Putative
           uncharacterized protein - Blastopirellula marina DSM
           3645
          Length = 155

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 190 TCVSQNTGTCPESSCACPETSCACPE 267
           TC +      PE +C  PE SCA PE
Sbjct: 94  TCCAPEPACAPEPTCCAPEPSCAAPE 119


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,417,653
Number of Sequences: 1657284
Number of extensions: 4704627
Number of successful extensions: 12857
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12832
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)