Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A10
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    29   6.9  
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     28   9.1  

>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +2

Query: 353 KKKKXRXXXXKXKKKXXKKKXXXXKXXXXXXXXXKKKXXKK 475
           KKKK +    K KKK  KKK    K         KKK  K+
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108



 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +2

Query: 356 KKKXRXXXXKXKKKXXKKKXXXXKXXXXXXXXXKKKXXKKK 478
           KKK +    K KKK  KKK    K         KKK  KK+
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108


>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 429 FFXXXXFFXXXFFFXFXXXXLFFFF 355
           FF    FF   FFF F     FFFF
Sbjct: 62  FFFFFFFFFFFFFFFFFFFFFFFFF 86



 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 426 FXXXXFFXXXFFFXFXXXXLFFFFF 352
           F    FF   FFF F     FFFFF
Sbjct: 62  FFFFFFFFFFFFFFFFFFFFFFFFF 86


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,444,170
Number of Sequences: 37544
Number of extensions: 29925
Number of successful extensions: 317
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)