Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A10
         (922 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030421-1|ABO52841.1|  491|Drosophila melanogaster IP17579p pro...    33   0.42 

>BT030421-1|ABO52841.1|  491|Drosophila melanogaster IP17579p
           protein.
          Length = 491

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 19/44 (43%), Positives = 20/44 (45%)
 Frame = +2

Query: 353 KKKKXRXXXXKXKKKXXKKKXXXXKXXXXXXXXXKKKXXKKKXK 484
           KKKK +    K KKK  KKK    K         KKK  KKK K
Sbjct: 445 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 488



 Score = 33.5 bits (73), Expect = 0.42
 Identities = 19/44 (43%), Positives = 20/44 (45%)
 Frame = +2

Query: 353 KKKKXRXXXXKXKKKXXKKKXXXXKXXXXXXXXXKKKXXKKKXK 484
           KKKK +    K KKK  KKK    K         KKK  KKK K
Sbjct: 446 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 489



 Score = 33.5 bits (73), Expect = 0.42
 Identities = 19/44 (43%), Positives = 20/44 (45%)
 Frame = +2

Query: 353 KKKKXRXXXXKXKKKXXKKKXXXXKXXXXXXXXXKKKXXKKKXK 484
           KKKK +    K KKK  KKK    K         KKK  KKK K
Sbjct: 447 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 490



 Score = 33.5 bits (73), Expect = 0.42
 Identities = 19/44 (43%), Positives = 20/44 (45%)
 Frame = +2

Query: 353 KKKKXRXXXXKXKKKXXKKKXXXXKXXXXXXXXXKKKXXKKKXK 484
           KKKK +    K KKK  KKK    K         KKK  KKK K
Sbjct: 448 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 491



 Score = 31.9 bits (69), Expect = 1.3
 Identities = 18/44 (40%), Positives = 20/44 (45%)
 Frame = +2

Query: 353 KKKKXRXXXXKXKKKXXKKKXXXXKXXXXXXXXXKKKXXKKKXK 484
           +KKK +    K KKK  KKK    K         KKK  KKK K
Sbjct: 444 QKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 487


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,540,308
Number of Sequences: 53049
Number of extensions: 45788
Number of successful extensions: 332
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)