Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_A09
(864 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8675| Best HMM Match : Aminotran_1_2 (HMM E-Value=0) 141 6e-34
SB_57277| Best HMM Match : Phage_T7_Capsid (HMM E-Value=6.7) 101 8e-22
SB_51759| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_21713| Best HMM Match : ShTK (HMM E-Value=3.9e-05) 33 0.23
SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_24421| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_30783| Best HMM Match : RasGAP (HMM E-Value=3.2e-34) 30 2.1
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_33928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 3.7
SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 29 4.9
SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45) 29 4.9
SB_20938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_16162| Best HMM Match : Transposase_8 (HMM E-Value=3.8) 28 8.5
SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_8675| Best HMM Match : Aminotran_1_2 (HMM E-Value=0)
Length = 512
Score = 141 bits (342), Expect = 6e-34
Identities = 72/160 (45%), Positives = 97/160 (60%), Gaps = 6/160 (3%)
Frame = +3
Query: 288 YRDDEGKPFVLPSVRKAEEILHSRG-----LNHEYAPISGEATYTDAVAKLAFGEDSPVI 452
YRD++GKP+VLP V K E L ++G LNHEY I G ++DA KL G D P I
Sbjct: 106 YRDNDGKPWVLPVVSKVETQL-AQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAI 164
Query: 453 KNRSNCTVQTLSGTGALRLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPH-KKYR 629
C +Q++SGTG++ LGL+F+ + Y K ++ PTWGNH + + ++YR
Sbjct: 165 AQNRVCGIQSISGTGSVFLGLKFLYQFY-NCKTAYISKPTWGNHLKTLKAVGFTDIREYR 223
Query: 630 YFDPKTNGFDLQGALEDISKIPEGSIILLHACAHNPTGVD 749
Y+ +T D ED+ K PEGSII+LH CAHNPTGVD
Sbjct: 224 YYKAETCSVDFDAMWEDLEKAPEGSIIVLHECAHNPTGVD 263
Score = 85.4 bits (202), Expect = 5e-17
Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
Frame = +3
Query: 171 ASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEIL 350
AS+ + +V + P D + + Y KD P K+NLGVGAYRD++GKP+VLP V K E L
Sbjct: 2 ASTNLFKDVPLVPTDHVFHVMACYNKDKDPSKINLGVGAYRDNDGKPWVLPVVSKVETQL 61
Query: 351 HSRG-----LNHEYAPISGEATYTDAVAKLAFGEDSPVI-KNR 461
++G LNHEY I G ++DA KL G D P I +NR
Sbjct: 62 -AQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAIAQNR 103
>SB_57277| Best HMM Match : Phage_T7_Capsid (HMM E-Value=6.7)
Length = 130
Score = 101 bits (242), Expect = 8e-22
Identities = 43/64 (67%), Positives = 55/64 (85%)
Frame = +3
Query: 153 GCTGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVR 332
G +R SS WW++V+ GPPD ILG+TEA+K+DT+PKK+NLGVGAYRDD GKP+VLPSV+
Sbjct: 42 GYAAVRLSS-WWSHVEAGPPDAILGVTEAFKRDTNPKKMNLGVGAYRDDTGKPYVLPSVK 100
Query: 333 KAEE 344
KA +
Sbjct: 101 KASD 104
>SB_51759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 52.0 bits (119), Expect = 6e-07
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +3
Query: 288 YRDDEGKPFVLPSVRKAEEILHSRG-----LNHEYAPISGEATYTDAVAKLAFGEDSPVI 452
YRD++GKP+VLP V K E L ++G LNHEY I G ++DA KL G D P I
Sbjct: 2 YRDNDGKPWVLPVVSKVETQL-AQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAI 60
Query: 453 -KNR 461
+NR
Sbjct: 61 AQNR 64
>SB_21713| Best HMM Match : ShTK (HMM E-Value=3.9e-05)
Length = 378
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 715 CTRAHTTPPVLTPKPSDWEQLSKVIKERKLFPFLRHGVSR 834
CTR H V PK ++W++ S + KL PFLR G ++
Sbjct: 40 CTRRHGCVDVF-PKCAEWKKNSNMCSNPKLAPFLRFGCAK 78
>SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 437 RQSCHQK*EQLYCTDIVRHWRTPTRTRVHNETLR 538
+Q CH K EQL D+ ++T +++NET R
Sbjct: 148 KQVCHDKYEQLPYDDVQNFFKTHISLKINNETFR 181
>SB_24421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +3
Query: 438 DSPVIKN---RSNCTVQTLSGTGALRLGLEFITKHYAKAKEI--WLPTPTWGNHPQICNT 602
D P++++ +SNC+V +G E ++HY K LP+ TW N +C
Sbjct: 3 DCPILQSELIKSNCSVADEYSSGT-HCAFECDSQHYLKGATTIACLPSGTWDNKQPVCIE 61
Query: 603 LNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSI 707
HK KT+ +GA + I GS+
Sbjct: 62 NATMHKSTPPATTKTS--KNKGASSQTATIAGGSV 94
>SB_30783| Best HMM Match : RasGAP (HMM E-Value=3.2e-34)
Length = 912
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -2
Query: 383 GSILMVESSTVKNFFCLSDRRQNKWFSLIVSICSNPKIYFFRMCVLLVCFCN 228
G ++ V S N L D+ + +S PK Y++ + + +CFCN
Sbjct: 411 GRLIEVVHSHNLNAVLLPDQLSGRRPKWEISFLGLPKFYWYNIMIYAICFCN 462
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 827 TPCRRNGNNFLSLITLESCSQSLGLGVNTGGVVCARVQQNNG 702
TPCR NG + + + SC++S G G T C + +NG
Sbjct: 83 TPCRVNGG-WSAYSSWSSCTKSCGGGTQTRTRTCTNPKPSNG 123
>SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 213 DVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGLNH 371
DV YK+D + NLGV AYR P +LP + +EI++++G+ +
Sbjct: 84 DVACDSYHKYKEDVQLLR-NLGVKAYRFSISWPRILP--KGTKEIINTKGIEY 133
>SB_33928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +3
Query: 441 SPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHK 620
S V ++ + ++T + TG L + +HY +++ P P W Q ++LN+
Sbjct: 177 SLVDESTLSAAIKTATITGTLSWDVRQALRHYVHQQDV--PVPAWPLMDQPLDSLNIASL 234
Query: 621 KYRY 632
+ RY
Sbjct: 235 RIRY 238
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +3
Query: 441 SPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHK 620
S V ++ + ++T + TG L + +HY +++ P P W Q ++LN+
Sbjct: 714 SLVDESTLSAAIKTATITGTLSWDVRQALRHYVHQQDV--PVPAWPLMDQPLDSLNIASL 771
Query: 621 KYRY 632
+ RY
Sbjct: 772 RIRY 775
>SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1227
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 522 ITKHYAKAKEIWLPTPTWGNHPQICN 599
+T AK +WL P++GN PQ N
Sbjct: 92 VTHRSAKESRLWLSEPSYGNWPQQLN 117
>SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45)
Length = 671
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 328 TEGKTNGFPSSSLYAPTPRFTFL 260
++ KT GF SSS P PRF F+
Sbjct: 377 SQEKTKGFDSSSWMKPNPRFMFM 399
>SB_20938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -3
Query: 502 SAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLS 362
+ PV N+CTV ++ F++ GL +AT + V+ + W++
Sbjct: 24 AVPV-SNICTVFIIYFILRGLLHKTVKVATVARVVSDIIFSHPYWIT 69
>SB_16162| Best HMM Match : Transposase_8 (HMM E-Value=3.8)
Length = 92
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 678 DISKIPEGSIILLHACAHNPTGVDPQAQRLGTTFQGDQRKEI 803
+ S IPE +++L + N G+DP RL T D RK I
Sbjct: 42 EASDIPENDLVVLIKNSANEAGMDP---RLSKTIAKDVRKRI 80
>SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = -3
Query: 472 VQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RISSAFLTEGKTNGFPSSS 293
V + FLM GL+ +V V L+ A++W+S + + F ++ S
Sbjct: 873 VNQVFFLMLGLNQISGFCVAVAVIVHYFLLAAFAWMSVMAYDVMKTFASKAVLQASNSRK 932
Query: 292 LYAP--TPRFTFLGCVSFL 242
+ FTF V FL
Sbjct: 933 TFIKYCCAAFTFPAIVVFL 951
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 683 IKNSRRFHYSVARVRTQPHRC*PPSPATGNNFPR 784
+ N R + R++T P C PPSP N+ R
Sbjct: 423 VVNDRGMYSCPKRMQTGPGECNPPSPKEANDLSR 456
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,661,129
Number of Sequences: 59808
Number of extensions: 718384
Number of successful extensions: 1775
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1770
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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