Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A07
         (890 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   3.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.6  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   7.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 224 LTVDCATSKKGKTRRFLSTLHHNSPQLSSR 313
           LT +CAT  +      + TLHH+  +L +R
Sbjct: 562 LTKNCATKAQSVVLGRICTLHHHLSKLVTR 591


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 316 GLFGLKNGAEIPFDALYNADACTLTSCPTEAGKTQTL 426
           G+ G+KN +   FD ++ +  CT   C  EA KT  L
Sbjct: 136 GIVGVKNASLFIFDLIFLSFRCT-KLC-KEANKTAFL 170


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 388 TSCPTEAGKTQTLDFXFAYW 447
           +S     GKT  LD+ F +W
Sbjct: 311 SSSEENEGKTTQLDYFFTFW 330


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 388 TSCPTEAGKTQTLDFXFAYW 447
           +S     GKT  LD+ F +W
Sbjct: 311 SSSEENEGKTTQLDYFFTFW 330


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 510 LSLSSFQSFHLNSKFPVGSFFPI 442
           L+L + QS    SKF    FFP+
Sbjct: 341 LALLAQQSTSRTSKFSAAGFFPV 363


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 230 VDCATSKKGKTRRFLSTLHHN 292
           + CA +  GKT  F+  + HN
Sbjct: 199 MSCAQTGSGKTAAFMLPIIHN 219


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 323 KRPVLSLVVENCGVKSKETXAFXPFLRWHS 234
           K+ + S  +  CG    +T      LRWH+
Sbjct: 311 KKNIHSCHIPGCGKVYGKTSHLKAHLRWHT 340


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +2

Query: 8   FXXLXHLSGLPXXLLRXXCXASACPXWLSPLGCXSLHFSAVVSLXSTS 151
           F  L HL   P  LL   C A   P  L  +    LH   ++   +T+
Sbjct: 276 FSCLLHLVVTPYYLLIEVCNAGYLPFILLQVAWIVLHLIRLMYQVTTN 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,320
Number of Sequences: 336
Number of extensions: 2044
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)